Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00036 ATGCAGCTCCAATTTGATTCCCAGTTTTTCATGTCCATAGTGTTTCTTGGTTTTGTTGGATTGTTGTGTCTTTTGTACACTTCCTTGGTGGAGAAGCCAAATAGGCTTCGCTCTAAGCTAATGAAGCAAGGTATCAGTGGTCCACCTCCAACTATACTGCTTGGAAATATTGTGGACATAAAGAAAGCTCGGTCTACCACTTCAAATTCTTCTTCTTTTGAACCCCCTGCCTCTCACAACTGTGCTTCTGTTCTCTTTCCATTGTTTGATAAATGGAGGGAGCAGTATGCAGGTCAAGTGTTCATGTTTTCTCTTGGGAACAGACAAATACTGTGTGTGAGCCAACCTGACATAGTGAGAGATATCACCATATGCACATCCTTGGACTTGGGGAAGCCTTCATATCAACAGAAACAACTAGGGCCTTTGCTAGGTCAGGGCATTTTAACTTCAAATGGGACTACATGGGTCCATCAAAGAAAGATCCTAGCTCCAGAACTATACATGGAAAAGGTTAAGGGAATGATGAATATAATTAGTGAGTCTGCTATATCTATGCTAAACTTGTGGAATAGTAGAACAGAAGCAGAAGGTGGAGTTGCTGATATAAAAATTGATGAGTACATGAGAAATTTCTCTGGGGATGTTATTTCAAGAGCATGCTTTGGAAGCAATTATTCCAAGAGGGAAGAAATTTTCATGAAACTTGGAGCTCTCCAAGAGATCATGTCCTGGAAAAATGTATCCATTGAGGTCCCTGGCATGAGATACCTTCCAACGAAGACCAATAGGGAAGCATGGACATTAGAAAAGGAGGTAAAAAATTTGATACTCCAGGCCCAGGGGGTGAAGGAAAGAAAGGAAACTAGTTTTCAGAAGGACATGCTGCAAATGGTTCTTGAAGGTGCTAAGAATAGTAATCTCAGTCAAGAGGCCACTGACTGGTTTATTGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTGCAGCTACATGGTGCCTGATGTTGCTGGCCTCAAACCAAAATTGGCAAGATCGTGCTCGCGCTGAGGTGCTAGAAATTTGCAGGGGTAGAATCCCAGATTTTAATATGCTTTGTAAGATGAAGCAGCTAACAATGGTTATTCATGAATCATTGCGCCTTTACCCCCCTGTAGCTGTGGTGTCAAGGCAAGCCTTCAAGGACATGAAAATTGGTAACATTGATGTCCCTAAGGGCTTTAACCTTTGGATGATGGTAGTAACTTTGCATACAAATCCAGATATCTGGGGAGATGATGCCTACAAATTCAACCCAGAAAGATTTGCCAATGGAACCATAGGTGCTTGTAAGTTGCCACACATGTACATGCCCTTTGGGGTTGGTCCACGAGTGTGTCTTGGGCAGAACTTGGCTATGGTTGAACTTAAGATGCTGATAGCTCTCATCTTGTCCAAATTCACTTTCTCCCTCTCTCCGCGATACGTTCATTCGCCTACGCTTAGGTTGCTCATAGAGCCTGAGCATGGAGTCCATCTCTTGGTGAAAAAACTATGA 1554 0.4254 MQLQFDSQFFMSIVFLGFVGLLCLLYTSLVEKPNRLRSKLMKQGISGPPPTILLGNIVDIKKARSTTSNSSSFEPPASHNCASVLFPLFDKWREQYAGQVFMFSLGNRQILCVSQPDIVRDITICTSLDLGKPSYQQKQLGPLLGQGILTSNGTTWVHQRKILAPELYMEKVKGMMNIISESAISMLNLWNSRTEAEGGVADIKIDEYMRNFSGDVISRACFGSNYSKREEIFMKLGALQEIMSWKNVSIEVPGMRYLPTKTNREAWTLEKEVKNLILQAQGVKERKETSFQKDMLQMVLEGAKNSNLSQEATDWFIVDNCKNIYLAGYETTAVAATWCLMLLASNQNWQDRARAEVLEICRGRIPDFNMLCKMKQLTMVIHESLRLYPPVAVVSRQAFKDMKIGNIDVPKGFNLWMMVVTLHTNPDIWGDDAYKFNPERFANGTIGACKLPHMYMPFGVGPRVCLGQNLAMVELKMLIALILSKFTFSLSPRYVHSPTLRLLIEPEHGVHLLVKKL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00036 517 Pfam Cytochrome P450 89 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 35 509 - -
Pumo1g00036 517 SUPERFAMILY Cytochrome P450 82 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00036 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Pumo1g00036 517 Gene3D Cytochrome P450 33 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00036 Pumo-Chr1 821291 824604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00036 118 514 Cytochrome P450 AT5G24900 43.521 4.62e-123 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00036 K24544 - gmx:100785420 944.88