Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00010 ATGGGTCATGCCCATTTTCTTTTGTTGTCAAATCTTCAAGGCTTTTGGCCTTCTTTGATTGCTATAATCACTTGCTTTACCATTATGATCAAAGCCCTAAGATACAACTTCATTGAGATTTTTTCCAACAAACAAAAACCAAAACTCCCCCCAGGCCCCAAACCATGGCCTATAGTTGGAAACCTTCCTGAAATGCTTGTTAACAAACCTGCATATCAGTGGATACACAAGCTCATGAAAGAAATGAACACCCAAATTGCATGTATCCACCTAGGAAATGCCTATGTTATCCCAGTGACATGTCCCACCATTGCCAGTGAGTTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGATCACAAAGCATGTCCACTGATCTCATCAGTAGTGGATATTCAACCACAATTTTTGGGCCCTTTGGGGACCAATGGAAGAAAATGAAGAAGATCTTAACCAATAACTTGCTTTCCCAACACAAGCACCTATTGCTCCATGACAAAAGGATTGAAGAAGCTGACAACCTTATGTTTCACGTCTACAACAAATGCAAAAATGTGAACGATGGTGTTGGTGGCCTTGTGAATATCAGGAGTGCTGCAAGGCATTATTGTGGTAACCTAACCAGGAAAATTATTTTCAATACAAGGTATTTTGGGAAGGGTAGAGAGGATGGAGGGCCTGGTTTTGAGGAAGTAGAACATATTGATTCCATCTTCCATTTACTCAAGTATGTTTATGCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGCACTTGACTTGGATGGCCAAGAGAAGAAAGTGAAGGAAGCTTTGAGGATCATCAAGAAGTATCATGATCCCATTGTTCAAGACAGAATTAAACAATGGAATGATGGACTAAAGGTTGATGAAGAGGACTGGCTTGATACTCTTATCTCCTTGAAAGATGCCAGCAATAACCCATCATTGACATTTGAGGAAATCAGTGCACAAATTATAGAATTGCTGATTGCAACATTGGACAATCCATCAAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCTAAGTTGCTCCATCGAGCCATTGAAGAATTGGACAGTGTGGTAGGGAAAGAGAGGTTAGTCCAAGAATCAGATATACCTAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATTGGACCTTTTATTCCTCCCCATGTCTCTATGAGTGACACAATGGTGGGCAATTACTTCATCCCTAAGGGTAGCCATGTAATGCTAAGCAGACAAGAGCTTGGGAGAAACCCAAAAGTGTGGAATGAACCCTACGAGTTCAAACCAGAACGCCACCTCAAGAGTGATGGGTCTAAAGTAGTTTTGACAGAGCCAAATTTGAAGTTCATATCATTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTGATGCTTGGCACCACAATGACTGTGATGCTATTTGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACCACCCAATGTTTCAACAATCAACCTTGCTGAGTCAAATGATGATATTCTTCTTGCACAGCCACTTGTGGCAGTTGCTAAGCCAAGATTGGCACCAGAACTATATCTCCATTAA 1614 0.4151 MGHAHFLLLSNLQGFWPSLIAIITCFTIMIKALRYNFIEIFSNKQKPKLPPGPKPWPIVGNLPEMLVNKPAYQWIHKLMKEMNTQIACIHLGNAYVIPVTCPTIASEFLRKQDATFASRSQSMSTDLISSGYSTTIFGPFGDQWKKMKKILTNNLLSQHKHLLLHDKRIEEADNLMFHVYNKCKNVNDGVGGLVNIRSAARHYCGNLTRKIIFNTRYFGKGREDGGPGFEEVEHIDSIFHLLKYVYAFSVSDYMPCLRALDLDGQEKKVKEALRIIKKYHDPIVQDRIKQWNDGLKVDEEDWLDTLISLKDASNNPSLTFEEISAQIIELLIATLDNPSNAFEWALAEMINQPKLLHRAIEELDSVVGKERLVQESDIPKLNYVKACAREAFRLHPIGPFIPPHVSMSDTMVGNYFIPKGSHVMLSRQELGRNPKVWNEPYEFKPERHLKSDGSKVVLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWSAPPNVSTINLAESNDDILLAQPLVAVAKPRLAPELYLH 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00010 537 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 26 535 - -
Pumo1g00010 537 FunFam Cytochrome P450 9 42 533 - -
Pumo1g00010 537 SUPERFAMILY Cytochrome P450 50 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 Gene3D Cytochrome P450 42 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Pumo1g00010 537 Pfam Cytochrome P450 50 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 CDD CYP79 84 530 - -
Pumo1g00010 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00010 537 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00010 Pumo-Chr1 347388 349834 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00010 8 535 Cytochrome P450 AT4G39950 52.552 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00010 - K14984 gmx:100785254 974.541