Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00007 ATGCTTGCAACAGTGGACAATCCATCAAATGCTTTTGAATGGGGACTTGCGGAAATGATAAACCAGCCTGAGTTGCTCCACCGAGCTGTTGAAGAGTTGGACAGTGTGGTAGGGAAACAGAGATTGGTTCAAGAATCCGATATACCTAAGCTCAACTATGTGAAGGCTTGTGCAAAAGAAGCTTTTCGTCTTCATCCCATTGCACCTTTTATTCCTCCCCATGTCTCTATGAGTGACACAATGGTGGGCAATTACTTCATTCCTAAGGGTAGCCATGTAATGCTAAGCAGACAAGAGCTTGGGAGAAACCCAAAATTCAAACCAGAACGCCACCTCAAGAGTGATGGGTCTGACGTGGTTTTGACAGAACCAAATTTGAAGTTCATATCATTTAGCACAGGAAGGCGTGGTTGTCCCGGAGTGTTGCTTGGCACCACAATGACTGTGATGCTATTTGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACCACCCAATTTGTCAACAATCAACCTTGTTGAGTCCAACGATGATATCCTTCTTGCAAAACCACTTGTGGCAGTTGCTTAG 570 0.4526 MLATVDNPSNAFEWGLAEMINQPELLHRAVEELDSVVGKQRLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTMVGNYFIPKGSHVMLSRQELGRNPKFKPERHLKSDGSDVVLTEPNLKFISFSTGRRGCPGVLLGTTMTVMLFARLLHGFTWSAPPNLSTINLVESNDDILLAKPLVAVA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00007 189 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 131 140 IPR017972 GO:0005506|GO:0016705
Pumo1g00007 189 Gene3D Cytochrome P450 1 185 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00007 189 SUPERFAMILY Cytochrome P450 1 184 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00007 189 PANTHER CYTOCHROME P450 98A9 3 170 - -
Pumo1g00007 189 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00007 189 PRINTS E-class P450 group I signature 128 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00007 189 PRINTS E-class P450 group I signature 12 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00007 189 PRINTS E-class P450 group I signature 138 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00007 189 Pfam Cytochrome P450 1 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00007 Pumo-Chr1 299828 300418 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00007 1 189 Cytochrome P450 AT5G05260 62.245 4.48e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00007 - - gmx:100809902 357.836