Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00001 ATGCTCCTGTCTCTGACGCGCTCCGCGCGTGCGTACTGTGCAGTTGCCGTGGAGTGCAGCGTCAAGTACCTCGCCACGTGCCCCGACGACTCTGCCGGAGAGCGCGATGCAGCGTATTTGGCACGGCCGTGTGGCGGCGCTGGAGCGTGCCAGAGCGGGCTGGTCTTTGGCGAGTTGGTGCAATGGCGTGACGACGTCGAGGGCGCGATGGTGGAATCCAAGGTTCGCGAGAAGCTGGCAAGTTTGAATAGTAGGAGCGACGAGATGAACGAGGTGAGGGCGTATTTGAAGGAAGCGTGGGAAACGATGGGGCCTTCATTTTTGGAAACGGTTGTGGCAATGTCGAAGGAGGGTGTAGGTGCTCATGATAATGATAATGATAATGATAGTGATAGTGATAATGATGATGATCATGGCGATGATGATGCATACATGGAGGATGTGGCAATGCATGATGAGAATCAGGGCAAGGAACCATTGGAAGAGAGAATTGATGCAAATCAGGAAGTGGGTGGGTGTGACTCAACTCCTCAGAGAGATAAAGGTGTTATAGCTAATGGAAGTGGTGGAAGTAGTCTTGCTTAA 585 0.5282 MLLSLTRSARAYCAVAVECSVKYLATCPDDSAGERDAAYLARPCGGAGACQSGLVFGELVQWRDDVEGAMVESKVREKLASLNSRSDEMNEVRAYLKEAWETMGPSFLETVVAMSKEGVGAHDNDNDNDSDSDNDDDHGDDDAYMEDVAMHDENQGKEPLEERIDANQEVGGCDSTPQRDKGVIANGSGGSSLA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00001 194 MobiDBLite consensus disorder prediction 119 194 - -
Pumo1g00001 194 PANTHER MYB TRANSCRIPTION FACTOR 9 180 - -
Pumo1g00001 194 MobiDBLite consensus disorder prediction 128 143 - -
Pumo1g00001 194 MobiDBLite consensus disorder prediction 144 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00001 Pumo-Chr1 73075 73822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00001 11 110 Single Myb Histone (SMH) Gene Family AT1G15720 29.412 6.65e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00001 - - gmx:100791258 179.104