Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo199g00013 ATGGAGGGCAAAGAAGAGGATGTGAGAGTTGGAGCCAACAGGTATGGAGAGAGGCAGCCAATAGGAACTGCTGCTCAGGCCAAAGACTACAGAGAGCCACCCTCTGCTCCTTTCTTTGAGCCTGGTGAATTGTCATCATGGTCTTTCTATAGGGCTGGCATAGCAGAGTTTGTGGCCACTTTCTTGTTCCTTTACATCACAGTGTTGACTGTGATGGGTGTGGCCAAATCCAAAAGCAAGTGTTCCACTGTGGGGATCCAAGGCATAGCTTGGGCTTTTGGGGGAATGATCTTTGCTCTTGTTTATTGCACAGCTGGCATCTCAGGGGGTCATATTAACCCAGCAGTGACATTTGGGCTGTTCTTGGCACGCAAGCTCTCTATGACAAGGGCAATTTTTTACATAATTATGCAGTGCTTGGGAGCAATTTGTGGGGCCGGTGTAGTCAAGGGGTTCGAGCCACACATCTATGAGAGGGTCGGTGGTGGTGCTAACACAATTGCTAAAGGGTACACCAACAGTGCTGGCCTTGGAGCAGAGATTGTTGGCACATTTGTGCTTGTTTACACTGTCTTCTCTGCCACTGATGCCAAAAGAAATGCTAGAGACTCCCATGTTCCAATTTTGGCACCACTGCCTATTGGTTTTGCTGTGTTTCTAGTGCACTTGGCTACAATTCCTGTTACAGGGACTGGTATCAACCCTGCTAGAAGTCTAGGTGCAGCCATTATCTTCAACAAGGAACAAGCTTGGAATGACCATTGGATTTTTTGGGTTGGGCCTTTCATTGGGGCAGCACTTGCAGCTTTGTACCATCAGGTAGTGATCAGGGCCATCCCCTTCTCATCAAAGTGA 855 0.4819 MEGKEEDVRVGANRYGERQPIGTAAQAKDYREPPSAPFFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVAKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSMTRAIFYIIMQCLGAICGAGVVKGFEPHIYERVGGGANTIAKGYTNSAGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAAIIFNKEQAWNDHWIFWVGPFIGAALAALYHQVVIRAIPFSSK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo199g00013 284 ProSitePatterns MIP family signature. 111 119 IPR022357 -
Pumo199g00013 284 CDD MIP 51 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 Gene3D Glycerol uptake facilitator protein. 36 281 IPR023271 -
Pumo199g00013 284 Pfam Major intrinsic protein 43 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 NCBIfam MIP family channel protein 55 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 280 IPR034294 -
Pumo199g00013 284 PRINTS Major intrinsic protein family signature 93 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 PRINTS Major intrinsic protein family signature 130 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 PRINTS Major intrinsic protein family signature 255 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 PRINTS Major intrinsic protein family signature 179 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo199g00013 284 FunFam Probable aquaporin PIP1-2 36 284 - -
Pumo199g00013 284 SUPERFAMILY Aquaporin-like 44 277 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo199g00013 1 284 Major Intrinsic Protein MIP AT3G61430 84.912 5.94e-175 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo199g00013 K09872 - gmx:100803259 559.296