Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo199g00009 ATGCCTTCCTCTTCCACCACCATAGTCTCCAAATGCGTGATCCATCCCGACCAGAAATCCAACATAAAACCTTTGAGACTCTCTGTTTCCGACCTTCCAATGTTGTCGTGTCACTATATTCAGAAGGGGGTGTTGCTCACCGCACCACCCTCTTCTTTCGACGACATGATACTCTCTTTGAAACACTCTCTTTCTATTGCTCTCTCGCACTTCCCCGCTCTCGCGGGAAGGTTTAACACTGATTCCGAGGGTTATGTTCATATTGTCTGCAACGACGCTGGAGTGGATTTTATTCACGCGAAAGCGAAACACCTGACTCTAAACGCCGTCGTTTCGCCGTCGCTGGTCGACGTTCACCCTTGCTTCAAGGAGGAGTTCTTCGCCTACGACATGACGATCTCCTACGCTGGCCACCACGCCCCTCTCGCCGCCGTCCAGGTGACGGAACTCGCCGACGGCGTCTTTGTCGGCTGCACCGTCAACCACTCCGTCACCGACGGCACCTCCTTCTGGCACTTCTTCAACACGTTCGCCGCCGTCACCAAAGGCGGCGCCGCCAAGAAGGTCCTCCGCGCGCCGGACTTTACCAGGGACACCGTCTTCAACTCCGCCGCCGTCCTCCCCGTCCCCGCCGGCGGACCCGCCGTCACCTTCGACGCCAACGAGCCTCTCCGGGAACGCGTCTTCCACTTCTCCCGCGAAGCCATTCAGAAACTCAAACAACGAGCCAACAACTCCGTCAACAACGAACTAACGGAAGTAATGGGAAAACAAGCAAATGACGGTTGGAAAATCGTTAACGTTAACGGTAACGGTAACGGAAAGATTAACTGTAACGGAAGAAACGAGATCTCGTCGTTTCAGTCGTTATCTGCTCAACTCTGGCGAGCGGTGACGCGCGCGAGGAAATTCAGCGACCCTGCCAAAACGTCGACGTTTCGGATGGCGGTGAATTGCCGCCACCGTCTAAACCCTAAGATGGACGCGTTTTACTTCGGCAATGCGATTCAGAGCATTCCGACCGTGGCAACCGTCGGAGACATTCTCTCGCGCGATCTGCGTTTCTGCGCTGAGCTGCTGCACCGTAACGTCGTCGCGCACGACGACGCTACGGTGCGCCGCGGCATAAAGGATTGGGAGAACGCGCCGAGGCTGTTTCCTCTTGGAAACTTCGACGGTGCTATGATCACTATGGGAAGTTCTCCGCGTTTTCCTATGTACGACAACGACTTCGGCTGGGGAAGACCCGTCGCGATTCGGAGCGGAAAAGCGAACAAGTTCGACGGGAAGATCTCTGCGTTTCCGGGGAGAGAGGGAAACGGCAGTGTGGATCTCGAAGTCGTTTTGGCCCCGGCGACCATGGCGGGGCTCGAAAACGACATCGAGTTTATGCAATACGTAACGCAGGTGATCGTGTGA 1419 0.5574 MPSSSTTIVSKCVIHPDQKSNIKPLRLSVSDLPMLSCHYIQKGVLLTAPPSSFDDMILSLKHSLSIALSHFPALAGRFNTDSEGYVHIVCNDAGVDFIHAKAKHLTLNAVVSPSLVDVHPCFKEEFFAYDMTISYAGHHAPLAAVQVTELADGVFVGCTVNHSVTDGTSFWHFFNTFAAVTKGGAAKKVLRAPDFTRDTVFNSAAVLPVPAGGPAVTFDANEPLRERVFHFSREAIQKLKQRANNSVNNELTEVMGKQANDGWKIVNVNGNGNGKINCNGRNEISSFQSLSAQLWRAVTRARKFSDPAKTSTFRMAVNCRHRLNPKMDAFYFGNAIQSIPTVATVGDILSRDLRFCAELLHRNVVAHDDATVRRGIKDWENAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPVAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPATMAGLENDIEFMQYVTQVIV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo199g00009 472 Pfam Transferase family 6 464 - -
Pumo199g00009 472 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 465 - -
Pumo199g00009 472 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
Pumo199g00009 472 Gene3D - 222 464 IPR023213 -
Pumo199g00009 472 Gene3D - 6 207 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo199g00009 60 459 Monolignol Biosynthesis Gene Families AT5G48930 25.952 1.27e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo199g00009 - - gmx:100804321 887.486