Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo193g00002 ATGAGGTATGATCCAACTTCAACCCAGGATGCTGACCCTGCTGAACACTATCAAATGTTATTAAGGCCTGGTGAGGCTTTGGCTGTGAACTTCCCTTTGCTACTCCATCATACGGCTGAGGAGAGTGTTGATATGAGTAATCCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTTCTCCCAAGGTAACTACATTGGTTGAGCAAGAGTCAAACACAAATACCACTTCTTTCTTCATCTGGTTTATAGAAACCTTGGATTACTACTTGGCAATGTTTAAGTCCATTGATGTGTCTCTTCCAAGAAAGAGCAAGGAGCGGGTTAATGTGAAGCAACATTGTCTGGCACGGGATATTGTCAATATTATTGCTTGCGATGGGAAGGAATGGTTAGAGAGAAATGAACTGAAATATTGTAGTGGGGGTAGAAATATGTTGCTGACTGAGGTTTATGTTGATTTCCAGGACCATGTGTTCCTTATCATTGTTTTAAGGGTCACTGTTCCATATGTCACAGTGATGCAGATTACTGTATACCAATTCTTTTACAAAATGTTGAGTTATTATCTGAATAAGCACTTGGAGACGCATTTCTGGTGGCACCCCAAAAGAGATTATGCCCAATTGTGTTAA 633 0.4044 MRYDPTSTQDADPAEHYQMLLRPGEALAVNFPLLLHHTAEESVDMSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTSFFIWFIETLDYYLAMFKSIDVSLPRKSKERVNVKQHCLARDIVNIIACDGKEWLERNELKYCSGGRNMLLTEVYVDFQDHVFLIIVLRVTVPYVTVMQITVYQFFYKMLSYYLNKHLETHFWWHPKRDYAQLC 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo193g00002 210 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 135 IPR005202 -
Pumo193g00002 210 ProSiteProfiles GRAS family profile. 1 200 IPR005202 -
Pumo193g00002 210 Pfam GRAS domain family 14 135 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo193g00002 21 136 GRAS Transcription Factor Family AT5G48150 68.966 1.44e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo193g00002 GRAS 5.6e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo193g00002 - - gmx:100775665 205.682