Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo193g00001 ATGCTTGATGTTAGGCCTGGTGAGGCTTTGGCTATGAACTTCCCTTTGCAACTCCATCATATTCCTAATGGGAGTGTTGATATAAGTAATTCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTTCTCCCAAGCTAACTACATTGGTAGAGCAAGAGTCAAACACAAATACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGGATTACTATTTGGCAATGCTTGAGTCATTGATGTGTCTTTTCCAAGAAAGAGTAAGGAGAAAATTAATGTGGAGCAACATTGTCTGGCATAGGATATTGTCAACATTATTGCTTGCGAAGTGA 330 0.3879 MLDVRPGEALAMNFPLQLHHIPNGSVDISNSRDGLLRLVKSLSPKLTTLVEQESNTNTTPFFNRFIETLDYYLAMLESLMCLFQERVRRKLMWSNIVWHRILSTLLLAK 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo193g00001 109 Pfam GRAS domain family 1 94 IPR005202 -
Pumo193g00001 109 ProSiteProfiles GRAS family profile. 1 109 IPR005202 -
Pumo193g00001 109 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 93 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo193g00001 2 79 GRAS Transcription Factor Family AT4G17230 65.385 1.54e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo193g00001 GRAS 7e-25 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo193g00001 - - zju:107431716 140.584