Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo190g00010 ATGCCGGAGATCGACCAGGCGGCGGCGGCGGAGGACACCGCCTTGTTCGGAAAATACGAGCTCGGCCGCGTGCTCGGGTGCGGCGCGTTCGCGAAGGTGCACTACGCGCGCAACGTGCAGACGGGGCAGAGCGTGGCCGTGAAAATCATCAACAAGAAGAAGCTCGCCGGAACGGGCCTAGCCGGAAACGTGAAGCGCGAAATCACGATCATGAGCAGGCTCCACCACCCCCACATCGTGCGCCTCCACGAGGTCCTCGCCACCAAGACCAAAATCTTCTTCATCATGGACTTCGTCCGCGGCGGCGAGCTCTTCGCCAAAATCTCCAAAGGTCGCTTCGCCGAGGACCTCAGCCGCCGCTACTTCCACCAGTTGATCTCCGCCGTCGGCTACTGCCACTCCCGCGGCGTCTTCCACCGCGACCTCAAGCCCGAGAATCTCCTCCTCGACGAGAACGGCGATTTGAGGGTTTCCGATTTCGGGTTGAGTGCCGTTAGAGATCAGATCCGACCCGATGGCTTGCTCCACACCCTTTGCGGAACCCCTGCTTACGTGGCACCCGAAATTTTAGCTAAAAAAGGATACGATGGTGCCAAGATTGATGTGTGGTCATGCGGCGTCGTTTTGTTCGTGCTGGCCGCGGGTTACTTACCGTTTAACGACCCGAATTTGATGGTAATGTATAAAAAAATCTACAAAGGGGAGTTCCGGTGTCCGCGGTGGATGTCGCCGGAGCTGCGGCGGTTTTTGGCGAAGTTGCTTGATACCAACCCAGAAACAAGGATCACGGTGGATGGCATGACCCGGGACCCGTGGTTCAAGAAGGGTTACAAAGAGATAAAATTTCACGAGGAGGATTACCATGCATCCGGGTCGGGTTCGTTTTTCGGGCCGAAGGACGAGAGGGTGGTGAGTTTGAACGCTTTTGATTTGATATGTTTCTCGCCGAGTTTGGATTTGTCGGGGTTGTTCGGGGGAGACGGGGAGGGGGAGAGGCTGGTGACGCGGGAGTCGCCGGAGAGGGTTTTGGAGGCGGCGGAGGAGGCGGGGGCGGCGGCGGGGATGGCCTTGAGGTGGAAGAAGGAGTGTGGGTTGGAGTTGGAAGGGCTTAATGGGAGGTTTGGGGTTGCGGTCGACGTTTACCGGCTCACGGCGGAGCTCGCGGTGGTCGAGGTCCGGAAGAGAGGCGGCGACGCCGTGGCCTTGAGGGGTGTGTGGGAGGAGAGGTTGAAGCCTTTGTTGCTCGGGGGTGCAACCACGTCGTATAGTAGTGAGGAGGAACAACAAGAAGAACATCAACAACATGAACAACAAGAAGAACCTGAGTCGCAGGTTGCCGTTGACTGA 1347 0.5828 MPEIDQAAAAEDTALFGKYELGRVLGCGAFAKVHYARNVQTGQSVAVKIINKKKLAGTGLAGNVKREITIMSRLHHPHIVRLHEVLATKTKIFFIMDFVRGGELFAKISKGRFAEDLSRRYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGDLRVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKIDVWSCGVVLFVLAAGYLPFNDPNLMVMYKKIYKGEFRCPRWMSPELRRFLAKLLDTNPETRITVDGMTRDPWFKKGYKEIKFHEEDYHASGSGSFFGPKDERVVSLNAFDLICFSPSLDLSGLFGGDGEGERLVTRESPERVLEAAEEAGAAAGMALRWKKECGLELEGLNGRFGVAVDVYRLTAELAVVEVRKRGGDAVALRGVWEERLKPLLLGGATTSYSSEEEQQEEHQQHEQQEEPESQVAVD 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo190g00010 448 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Pumo190g00010 448 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo190g00010 448 CDD CIPK_C 307 414 - -
Pumo190g00010 448 Pfam NAF domain 305 357 IPR004041 GO:0007165
Pumo190g00010 448 FunFam Non-specific serine/threonine protein kinase 10 98 - -
Pumo190g00010 448 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo190g00010 448 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo190g00010 448 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Pumo190g00010 448 Gene3D Kinase associated domain 1, KA1 302 416 - -
Pumo190g00010 448 Gene3D Transferase(Phosphotransferase) domain 1 9 296 - -
Pumo190g00010 448 MobiDBLite consensus disorder prediction 425 442 - -
Pumo190g00010 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 409 - -
Pumo190g00010 448 FunFam Non-specific serine/threonine protein kinase 9 297 - -
Pumo190g00010 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Pumo190g00010 448 SUPERFAMILY Protein kinase-like (PK-like) 16 282 IPR011009 -
Pumo190g00010 448 MobiDBLite consensus disorder prediction 417 448 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo190g00010 1 415 CBL-interacting serine-threonine protein kinases AT2G30360 64.486 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo190g00010 Pkinase 2.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo190g00010 - - gmx:100799169 797.349