Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo183g00008 ATGGTGATGATATGGGAAGATCTGACAGTTGAGCACCCTGGAAGTAGTTTTGGAGCAGACAATAAGAAGTTGCTTAATGGAATAACTGGTTTTGCTGAAGCTGGTAGGATTATGGCTGTCATGGGTCCTTCTGGCTGCGGAAAAACCACCTTCCTTGACTCTTTCACTGGAAAACTTGCTGCAAATGTTGTAGTAACCGGGAACATTCTAATCAATGGGAAGAAGAAAAGCTTGTATTCCGAAGAAGTGTCCTACGTGGCACAAGAGGAACTTTTCTTGGGAACTTTGACTGTAAAAGAGACCCTCACTTACTCTGCAAACATGAGGCTTCCTTCTAAAATGACCAAAGAAGAGATAAACAAAGTGGTGGAAGAAACCATAATGGAAATGGGTCTGGAAGATTGTGCAGATACTAGGATTGGAAATTGGCATTGTCGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAGATTCTGACACAGCCATATGTGTTACTTCTTGATGAACCTACTAGTGGACTTGATAGTGCCTCAGCTTTCTATGTGATTCAATCTCTATGCCACATTGCTCATGATGGAAAGATAGTTATCTGCTCCATTCACCAGCCCAGTAGTGAAACTTTTGATCTGTTTGATGATTTGCTTTTGCTCTCAAGTGGGGAAACTGTTTATTTTGGAGAAGCCAAGATGGCTCTAAAGTTTTTTGCTGATGCAGCGTTACCCTGTCCTTCTAGAAGAAATCCTTCAGATCATTTCCTTCTGTGTATCAATTTGGACTTTGACTTGCATGCTTCTGCGCTAGCAAGAGCACAATTAGATTTGCCATCTTCATCAAATTCAGCACTGGGAACGAAAAAAGCTGAGATTAGAGAGATTCTCATTCGAAGTTATAAAAGTTCAGTGCTAATGATCAATGCGAGAAGAAGAATTCAACAACTGAAACCTAATGAAGAGCAAGAAATTAAGGCCAACATAGGTAGCAGTACCACATGGTGGAAGCAATTGTGTACATTGACCAAGCGATCTTTCCTAAACATGACTAGGGACGTTGGTTACTACTGGCTGAGGATAGTATTCTACATGCTGGTAGGAATCACTATTGGCACCCTTTTTTTTCATATTGGCACGGACAACAACTCAATCTTGGCTAGAGGAAAATGTGTATCATTCATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGGTGTTCTATGGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGCATTTGTAGTATCAAACACCATATCATCATTCCCTTTCCTTGTTCTAATATCACTCTCCTCCGGAATAATCATTTACTTCATGGTACAATTTCATCCGGGTTTAACTAATTGTGCATTTTTCTGCATCAACTTATTCTGCTGCCTATCTGTTGTTGAGTGCTGCATCATGATTGTAGCCTCAGTGGTCCCCAATGTGCTCATGGGCTTAGGAACAGGAACTGGTGTAATTGTCTTCATGATGATGCCCTCCCAAATATTCAGATCATTACCTGACATTCCAAAGTTCTTTTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTGCTTGGGCAGTGCAGGGACAATACAAGAATGACATGCTGGGGGTTGAATTTGATCCTTTTCTGCCAGGAGATGCCAAAGTTAGTGGAGAACAAGTCCTATCATTGGTATTTGGGGTTCCATTGGATCATAACAAATGGTGGGACTTAACAGCATTGGCTACCTTATTATTAGTTCACAGATTGGTTCTTTACTTGGTGCTTCGGTTTGTCAAAAGATCTAATTCACCTAAGCTGTGGTTCTATGCCAACAAAAGTCTACACTTGGCAGAAAGATGTTTATTCAATAACAAGTCATCTATTTCTTCCAGGAAACAGGCTCAGCATCCATTGTCATCAGCATCCATTATATCATGA 1965 0.4081 MVMIWEDLTVEHPGSSFGADNKKLLNGITGFAEAGRIMAVMGPSGCGKTTFLDSFTGKLAANVVVTGNILINGKKKSLYSEEVSYVAQEELFLGTLTVKETLTYSANMRLPSKMTKEEINKVVEETIMEMGLEDCADTRIGNWHCRGISNGEKKRLSIGLEILTQPYVLLLDEPTSGLDSASAFYVIQSLCHIAHDGKIVICSIHQPSSETFDLFDDLLLLSSGETVYFGEAKMALKFFADAALPCPSRRNPSDHFLLCINLDFDLHASALARAQLDLPSSSNSALGTKKAEIREILIRSYKSSVLMINARRRIQQLKPNEEQEIKANIGSSTTWWKQLCTLTKRSFLNMTRDVGYYWLRIVFYMLVGITIGTLFFHIGTDNNSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAAFVVSNTISSFPFLVLISLSSGIIIYFMVQFHPGLTNCAFFCINLFCCLSVVECCIMIVASVVPNVLMGLGTGTGVIVFMMMPSQIFRSLPDIPKFFWRYPMSYLSFAAWAVQGQYKNDMLGVEFDPFLPGDAKVSGEQVLSLVFGVPLDHNKWWDLTALATLLLVHRLVLYLVLRFVKRSNSPKLWFYANKSLHLAERCLFNNKSSISSRKQAQHPLSSASIIS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo183g00008 654 Gene3D - 6 255 IPR027417 -
Pumo183g00008 654 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 248 IPR003439 GO:0005524
Pumo183g00008 654 SMART AAA_5 34 233 IPR003593 GO:0016887
Pumo183g00008 654 Pfam ABC-2 type transporter 205 257 IPR043926 GO:0140359
Pumo183g00008 654 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 619 - -
Pumo183g00008 654 Pfam ABC transporter 28 176 IPR003439 GO:0005524
Pumo183g00008 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 236 IPR027417 -
Pumo183g00008 654 Pfam ABC-2 type transporter 338 543 IPR013525 GO:0016020|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo183g00008 32 209 Calmodulin-binding Proteins AT2G36910 27.568 1.54e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo183g00008 K05681 - gmx:100802207 1128.24