Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo183g00007 ATGTTTCCTACCAAAATGGAGTTGCAGGCTAATACAGGTATAGCAGTAGAGCATAAGAGGAGAGTGTGTCTGGTTTGGGAAGATTTGACAGTGGTGGCCTCAAATGTTAGCAGTAGTCCAAAAAAGGAACTGTTAAAAGGGTTAAGTGGTTATGCAGAACCAAACCGGATTATGGCACTTATTGGTCCTTCAGGTTCAGGGAAGTCTACTTTACTTGCTGCACTGGCTGGTATACTTCCCACCAATGTTAGCATGACCGGAAATGTACTACTCAACGGGACTACCAGAACTACAGGCTGCAGAGATATTTCTTATGTTACTCAAGAAGATTATTTCTTGGGAACTCTAACAGTGAAGGAAACCCTCACATATGCAGCTCACTTGAGACTTCCTGCTGATATGACTAAAAATGAGATTGAAGTGGTGGTAACCAAGATATTGGCTGAAATGGGTCTGCAAGATAATGCAGATAGCAGACTTGGGAATTGGCATTTGAGAGGCATAAGTACTGGAGAGAAAAGAAGGCTTACCATAGGCATTGAGATCTTAACTCAACCTCATGTGATGTTTCTGGATGAACCCACTAGTGGGTTGGATAGTGCAGCTGCTTTCTATGTGATTTCTTCTCTGTCAAACATAGCACATGATGGAAGAATAGTTATATGCTCCATTCACCAGCCAAGTGGTGAAGTTTTCAACCTTTTTGATGATCTAGTCCTCCTTGCAGGAGGTGAAGATATATATTTTGGAGAAGCAACTATGTCTGTAAAGTTCTTTGCTGATGCAGGGTTCCCTTGTCCAACTAGAAAGAATCCTCCTGAGCATTTCCTTCGTTGTGTTAGCTCAGATTTTGATAGTGTTGCAGCCTTAATACAGTCCAAAAATTATGAAGCCTCATCTTCATGGAATTCTCTAATGAATATGACAACAGAAGAGATTAAATCAGAACTCATAAAGTACTACAGGAATTCCATACATTCAGAAAATGCAAGGAAAAAAATCAGAGAAATCAAACAAAGTGAAGAACCTTTAGTTGGGAAGATATATGATACCAGCAGGCTGAAGCAGCTACGCACATTGACAAATAGATCAATCCTAAATATGACCAGAGACATTGGTTACTATTGGTTAAGGATTGTACTCTATATCTTGATATCAGTGAGTGCTGGTTTTCTTCTTTTCAACATAGGAACAAGTAATGAAGCAATCTTATCTAGAGGCAAGTGTGATGGATTCATCGTTGGCTTAATGATCATGCTGTGTTTAGGCGGAGTACCCTTTTACCATGAGGAATTAAAGGTCTTCAAACGTGAAAGGTTTGGAAATCATTATGGGGAGGCCATGTTTGTGCTGTCACATTTCCTCTCATCACTTCCTTTTGTTCTTGCAATTTCCCTCTCTTCAGGAACAATACTTTACCACATGGTGAACTTTCATCCAGGCTTCTCTCATTACTGCTATTTTTGCATGAGTATATTTTGCATCATTTCTGTCACAGAAGGCTGCACATTGTTCATTTCAGCACTTGCACCCGACCTATTGGTAGCAATGGGAACTGCAACTGGTGTAATTGTATTCATGATGGTGCCATCTAATATATTCAGAAGTCTAACAGACCTTCCAAAATTCTTTTGGCGCTATCCAATGTCCTATATCAGCTACATTACATGGTCAATACAGGGTCAGTTCAAGAATGACCTGATTGGTCTTGAATTTGAACCAGAGGTGCCTGGGGATACCAAGATAAAGGGTGAAGAGATACTTTACGACATGTTTGGAATTCGAACTGATTATTCGAAATGGTGGGACTTAGGAGTTCTGGTTTTGTTTTTGATAATTTATAGACTGCTCTTTTTCTTGGCTCTTAAGCACAAGGAGAGAGCTTCATCATTATTACAACACACCAAAAGAACTCTCCTAGACCATTTACTCAGAAGACCCTCATTGAAGAACAAATATATCTATTCCAAGCAACATCAATCCCTGCATCCTTTGTCAGCTCAGGAGGGTCTTTACTCTCCAATTTCTTAA 2031 0.3983 MFPTKMELQANTGIAVEHKRRVCLVWEDLTVVASNVSSSPKKELLKGLSGYAEPNRIMALIGPSGSGKSTLLAALAGILPTNVSMTGNVLLNGTTRTTGCRDISYVTQEDYFLGTLTVKETLTYAAHLRLPADMTKNEIEVVVTKILAEMGLQDNADSRLGNWHLRGISTGEKRRLTIGIEILTQPHVMFLDEPTSGLDSAAAFYVISSLSNIAHDGRIVICSIHQPSGEVFNLFDDLVLLAGGEDIYFGEATMSVKFFADAGFPCPTRKNPPEHFLRCVSSDFDSVAALIQSKNYEASSSWNSLMNMTTEEIKSELIKYYRNSIHSENARKKIREIKQSEEPLVGKIYDTSRLKQLRTLTNRSILNMTRDIGYYWLRIVLYILISVSAGFLLFNIGTSNEAILSRGKCDGFIVGLMIMLCLGGVPFYHEELKVFKRERFGNHYGEAMFVLSHFLSSLPFVLAISLSSGTILYHMVNFHPGFSHYCYFCMSIFCIISVTEGCTLFISALAPDLLVAMGTATGVIVFMMVPSNIFRSLTDLPKFFWRYPMSYISYITWSIQGQFKNDLIGLEFEPEVPGDTKIKGEEILYDMFGIRTDYSKWWDLGVLVLFLIIYRLLFFLALKHKERASSLLQHTKRTLLDHLLRRPSLKNKYIYSKQHQSLHPLSAQEGLYSPIS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo183g00007 676 CDD ABCG_EPDR 21 250 - -
Pumo183g00007 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 252 IPR027417 -
Pumo183g00007 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 268 IPR003439 GO:0005524
Pumo183g00007 676 Pfam ABC-2 type transporter 225 350 IPR043926 GO:0140359
Pumo183g00007 676 Pfam ABC-2 type transporter 356 561 IPR013525 GO:0016020|GO:0140359
Pumo183g00007 676 Pfam ABC transporter 45 196 IPR003439 GO:0005524
Pumo183g00007 676 SMART AAA_5 54 253 IPR003593 GO:0016887
Pumo183g00007 676 Gene3D - 15 260 IPR027417 -
Pumo183g00007 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 17 637 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo183g00007 38 237 Calmodulin-binding Proteins AT2G36910 27.014 4.77e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo183g00007 K05681 - aip:107646291 933.324