Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo183g00003 ATGGCTTCGTCTTCCTCCGATCCGGGAAAGTCCGCGGAGACGTCGGAGGCGGCGGTGGCGACCGACCAGCTCTTGCTCTACAGAGGATTGAAGAAGGCGAAGAAGGAGAGAGGTTGCACCGCCAAAGAGCGCATCAGCAAAATGCCACCGTGCGCCGCCGGCAAACGCAGCTCCATATACCGCGGCGTCACAAGGCATAGGTGGACTGGTCGTTATGAAGCGCATCTTTGGGATAAGAGTACGTGGAACCAAAATCAGAATAAGAAGGGAAAGCAAGGGGCGTATGATGATGAGGAAGCAGCAGCTAGAGCATATGATCTTGCCGCTCTCAAATATTGGGGTCCAGGGACTCTCATTAACTTTCCTGTGACTGATTATACAAGAGATCTTGAAGAAATGCAGAATATAGTCGAGGGAAGAGTACCTTGCATCTTTACGGCGGTGTGTGTATACTTCACAATGTTTTCTAACATGTATCCAAACTGCTGCTTACGCCTGATGCTTTCTGCAGGAAGAGCAGTGGTTTCTCAAGAGGACTATCAAAATATCGTGGACTCTCCAGGTGTGAATCTATCAATTCTTTTTTTACAGAAGCTGTCTGGCAATTAA 609 0.4877 MASSSSDPGKSAETSEAAVATDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNIVEGRVPCIFTAVCVYFTMFSNMYPNCCLRLMLSAGRAVVSQEDYQNIVDSPGVNLSILFLQKLSGN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo183g00003 202 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Pumo183g00003 202 PRINTS Ethylene responsive element binding protein signature 104 124 IPR001471 GO:0003700|GO:0006355
Pumo183g00003 202 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 136 - -
Pumo183g00003 202 Gene3D AP2/ERF domain 59 124 IPR036955 GO:0003700|GO:0006355
Pumo183g00003 202 SMART rav1_2 59 128 IPR001471 GO:0003700|GO:0006355
Pumo183g00003 202 Pfam AP2 domain 59 114 IPR001471 GO:0003700|GO:0006355
Pumo183g00003 202 SUPERFAMILY DNA-binding domain 58 123 IPR016177 GO:0003677
Pumo183g00003 202 ProSiteProfiles AP2/ERF domain profile. 59 122 IPR001471 GO:0003700|GO:0006355
Pumo183g00003 202 FunFam AP2-like ethylene-responsive transcription factor 58 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo183g00003 19 136 AP2-EREBP Transcription Factor Family AT2G41710 92.562 4.79e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo183g00003 AP2 6.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo183g00003 K09285 - gmx:100786651 257.299