Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo176g00001 ATGCCTAGAAAAAATAGTCTTAGTGTTGTTGACAAGCATCATGATGAAGTGGAATCTTATATGGAGAAATTAATGAATACTCAAAATTGTTGTGAGTCTCAATCAAATGGTAGCATTGATGTTGAACAAAATGCTGAATCAGGTTCTTTGGAGGCAAGGAAGGTTCGTGGACCTACCTTGTTAAAAGACATATGGAATATGTCTCCGGGAAAGAGAATTGATGTGCAATTTAATAGTCGCAACCAAGCCATAGGAAAGGAGGGTCGGAAGCTTTCTAGTTTTTTGGGCATTTTAGCTAGAAACCCAAGATTAGCTCCTTTAAACATAGAGGATTGGAGACATTTTGATCAAGATCAAAAAAAGAGATTGGTGGAGCTTGTGAGGAGGAAATTCTCAATCTCTGTACGTGGTGAAGAGTTTGTCAAAAAATCAATTGGAAAGAAATGGAAAGATTATAAATGTGAATTAAGGTGTACATATATGACAAAGTACAAGACCAAAGATGCCTTAATGAAAAATAGACCAAAACGTATACCAATGGACCAATGGATCGGTCTTGTTTCTTATTGGCTGTCTGACAAAGCAAAGAAGCGTAGCCAAGCAAATAGATGCAATAGAACAAAGCAAAAGATGTCTCACACTGGTGGATCTAAAAGCATTGGAACTTTAATGGCTGAAAAGGCCAAAGATGGGATAGAACCTACTAGGGCAGAAATTTTCATACTAACTCATAAGAAGCGTAAAGATGGAAGACCATTGGATGAGGAGTCTGCAAAAATAGTGGATATGATTCAAATAAAGTTGAACAATGGTGAAACATGTAATGAACAACCCACCGGTAGTGTTGCTTGGAAAGGAGATGTATACTCCCAAGTATTGGGAGAAGAAAGAAGTGGCTATGTTCGTGGCTTGGGACTTGGTCCAACTCCTTCTCAATTATGGGGTACTAAATCTAATATTCTTTCTAGTAACATGACTAATGAGGTAGTACAAATGTTGGAGCAAGAATTGAGGGAGTTAAAGAAGTCAAAGGAGAAACATGATGAAGAAATGGATTTGATGAAACAAAATCAAGACAAGTTAGTATCGGAGTTATCTTTCATGAGAAAAGTGTTAAATAAATATTTTCCTAAGGAGTTATCTATGGCTCAAAACTTTGGAAGCTCATTTGGACAGGTCCATGATACTAATAGTGGTTTTGAACAAGCACATTATGTTGAAAAGAAAATTCCAACTCCTCAAGGTAATATGTTCAAGCCAAGTGGTTCAATCAAGCCTGAGGGTCTGGACGAAGGTGATGGAAGATGGCATTATAATTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCTTTGGCTGGAGTGATCTCTTTAGCATCTTCTGAAACTGATATTAAGTATGATGAGATCAATGGTATCATGAAAGATTTTGATGAACTTGACCATCTTGCTTCTACTGGCCTCCACCTTGGGGACACCAAATGCATGGTAATCCAAGAAGAGCCAGAAGCCATCATTTGTGAAAAGAAGAATGTGGACCCTAAAACTGAAAAAAGGAAGAAAAGTACTGCTTCTGTTGATGATATCACTTCCTTGCTAAAGCTTGTGAGAAAAGATAATGATGATGCTGTTCGGAAACTAGCAGCAGAGGCACTTGCCAGTCTTGCCACAGATGCAATGCAGAGAAGGCCAGGATGTCCTCCCTGA 1722 0.3839 MPRKNSLSVVDKHHDEVESYMEKLMNTQNCCESQSNGSIDVEQNAESGSLEARKVRGPTLLKDIWNMSPGKRIDVQFNSRNQAIGKEGRKLSSFLGILARNPRLAPLNIEDWRHFDQDQKKRLVELVRRKFSISVRGEEFVKKSIGKKWKDYKCELRCTYMTKYKTKDALMKNRPKRIPMDQWIGLVSYWLSDKAKKRSQANRCNRTKQKMSHTGGSKSIGTLMAEKAKDGIEPTRAEIFILTHKKRKDGRPLDEESAKIVDMIQIKLNNGETCNEQPTGSVAWKGDVYSQVLGEERSGYVRGLGLGPTPSQLWGTKSNILSSNMTNEVVQMLEQELRELKKSKEKHDEEMDLMKQNQDKLVSELSFMRKVLNKYFPKELSMAQNFGSSFGQVHDTNSGFEQAHYVEKKIPTPQGNMFKPSGSIKPEGLDEGDGRWHYNSDNPESSTYAAGLALEALAGVISLASSETDIKYDEINGIMKDFDELDHLASTGLHLGDTKCMVIQEEPEAIICEKKNVDPKTEKRKKSTASVDDITSLLKLVRKDNDDAVRKLAAEALASLATDAMQRRPGCPP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo176g00001 573 PANTHER OS10G0409366 PROTEIN-RELATED 12 323 - -
Pumo176g00001 573 SUPERFAMILY Profilin (actin-binding protein) 444 516 IPR036140 -
Pumo176g00001 573 Pfam Profilin 460 515 IPR005455 GO:0003779
Pumo176g00001 573 Coils Coil 323 364 - -
Pumo176g00001 573 PRINTS Profilin signature 492 506 IPR005455 GO:0003779
Pumo176g00001 573 PRINTS Profilin signature 468 488 IPR005455 GO:0003779
Pumo176g00001 573 Pfam Plant transposase (Ptta/En/Spm family) 180 310 IPR004252 -
Pumo176g00001 573 Gene3D Dynein light chain 2a, cytoplasmic 441 531 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo176g00001 430 524 Cytoskeleton Gene Families AT4G29340 37.374 2.03e-08 51.6