LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo174g00003	ATGAATGGGAAAATGCCGAACGAGAAGCATGACTTGGTGCCTTCCACTACGGACGACGTCGTTAACGATGCCAGCGAAGAGGAAGATGGCCCTTGCCCCAAGTCACCAGTGAAGCCAAGCACTTCAAAAAGCAAGAGATGCCGAATGGATGCTATCTCGAGAGATACTCTCAGCTCTAACTCGTCTGGTGGTGATCATCAGCCAATTGTGGACCTTGGAAAGGACTTTGTTGAAGATGAAATCACTGATAAGCCGAAGGCTCGAAATTTTGTGTCTCATTCTGCAGTTGCATTGCGTTGCAGGGTTATGACTCCTCGCTGCATTGGAAACCCCTATTTTAAAAGCCTTTCAGAAAAGGAAATGGATCCTTTTGGAAGCCAAAGATCAAAATTTGAAGGCCTCTTCCCTGGACTTACTGTTGATTATTGTGTTCCACGCTACCACACTGACTTTCATGAGATTGAGCAAATTGGTAGAGGTCACTTTAGCAATGTTTTCAAAGTATTGAACCGAATAGATGGCTGCTTGTATGCTGTGAAACACAGCATCAGGAAGTTGTGCAGCGAAACAGAAAGTCTTATTATTGACCTTTTTGTTTCTTTAGGTTTCCAAGAGAACATTGTGGGATACTATTCTTCATGGTTTGAAGATGAACAACTGTATATTCAGATGGAGCTATGTTATCACAGCTTATCCATTAACAATTGTCCAGCATTACTTACTGCAGGACAAGAAATAGAAGCTTTATATCAGGTTGCCAGTGCATTGCAATTTATCCATGAGAGGGGAATAGCTCATCTTGATGTTAAGCCTGAAAATATTTATGTGAAAAATGGTGTTTATAAGCTTGGTGATTTTGGGTGTGCAACTCTACTTGATAATAGCCTGCCAATTGAGGAGGGTGATGCGCGTTATATGCCTCAAGAAATCCTCAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTCTCCCTGGGAGCTTCTATGTTTGAGCTAGTTTGCAGGTCGAGTTTGCCAGAATCAGAAACTCAGTCCTTTAATCTTAAAGTGGGAAAGTTGCCATCCTTGCCAGGAGTTTCAGTGAAATTTCAAAACTTGCTTAAGGTCATGATGGACCCTGATCCTGTTAAGAGGCCTTCTGCTACAGAGTTGGTGAAGAGGATCCTTAGAATAGCAAAAAATTGA	1188	0.4184	MNGKMPNEKHDLVPSTTDDVVNDASEEEDGPCPKSPVKPSTSKSKRCRMDAISRDTLSSNSSGGDHQPIVDLGKDFVEDEITDKPKARNFVSHSAVALRCRVMTPRCIGNPYFKSLSEKEMDPFGSQRSKFEGLFPGLTVDYCVPRYHTDFHEIEQIGRGHFSNVFKVLNRIDGCLYAVKHSIRKLCSETESLIIDLFVSLGFQENIVGYYSSWFEDEQLYIQMELCYHSLSINNCPALLTAGQEIEALYQVASALQFIHERGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASMFELVCRSSLPESETQSFNLKVGKLPSLPGVSVKFQNLLKVMMDPDPVKRPSATELVKRILRIAKN	395

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo174g00003	395	Gene3D	Phosphorylase Kinase; domain 1	142	227	-	-
	Pumo174g00003	395	MobiDBLite	consensus disorder prediction	1	48	-	-
	Pumo174g00003	395	SUPERFAMILY	Protein kinase-like (PK-like)	145	387	IPR011009	-
	Pumo174g00003	395	FunFam	Wee1-like protein kinase	226	393	-	-
	Pumo174g00003	395	Gene3D	Transferase(Phosphotransferase) domain 1	234	391	-	-
	Pumo174g00003	395	ProSiteProfiles	Protein kinase domain profile.	151	395	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo174g00003	395	Pfam	Protein kinase domain	151	387	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo174g00003	395	ProSitePatterns	Protein kinases ATP-binding region signature.	157	185	IPR017441	GO:0005524
	Pumo174g00003	395	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	264	276	IPR008271	GO:0004672\|GO:0006468
	Pumo174g00003	395	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED	91	388	-	-
	Pumo174g00003	395	SMART	serkin_6	151	390	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo174g00003	27	386	Core Cell Cycle Gene Families	AT1G02970	57.105	1.04e-140	408

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WEE	Pumo174g00003		Pkinase	7.3e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo174g00003	K06632		-	gmx:100784055	554.288