Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo167g00045 | ATGGAAGGAAACACCGCCGCCTTCTTGGTCTCAGAATCCCTCCGCGGCGCGCGCCAGTTGCTCCCTCTCTCACTCTCTGTCTTCCCTTCCCTTCCCATAGCGCCCAAATTTCTTACACTCCCAAAACGACAAGGAGAACAAGGATTGCGATTCTCTCCAAAACGACACTCGCAAGATAATGGCAATGGTAGAATGGATCCAGAAAACCAGGAAAAGGAGCGTAAGTGCTCTGAAGTTGTTGATTCTGATTTTTTGGATCCCAAGGATCCTATACACCAGAAGGATATACAGGAGGTCCAGGAAACCATTGAGGGGGTTGGAGACAAGGATATGGATTTTACTTCCAACAAGATGGTCCTAGATGATATAGAACTTATGATGGGAATAGAGGACATGTCTACCCAAGCAAATGGTTTTGATAAGGAGCAGAAGCTAATGAATGAGTTTGAGCTGGTAATGAAAGGAACTGAAGATCTTATTTGTGATAGTGAATTGATCCCCTTGAACTTGGGATTAGATGAGAAACATAATGATGGAGGTGAAGTTGGGTTGACGGATTACCAAGTAGAAATGGAAGAAGGAGAAATTTCTGGAGACTTGGGAATAGATGGCAATTCATTTGATGTGGCTTCTGCAGATGCTTTAATTTTACAACAGATGGAAGTAGATGAGGTTCAGAAGCCTGAAAATGTAACTGGAAACATGATATATCCTTCTAAGATTGAGAACCAAGAAAAGGAAACAGGCTATGACTCTAATTCCTCTTTGGTAAATGCACTTCAAGACGCCAATAATAGTGTACAAGTGGAGCCTAGAACTAGTGGCAAGAAAGGTATTGCATGCGGAGTTGAAGTAGCAATTTCTCAAAAAACTATTGAATGTCAGAAGGAAGATAAAACAAAGTTGGATAACGCCAGTAAAAAGAGTACGCGTGGTGGGAACAAAGGAAAAAAGAAGAAAGCAGACAGAAAGAAGAGAGCAGAAAAGAACAAAGAACTTGGTGTTAAAAGATTGCAGTTACAGCATGTACAAAGACCAAAAGTTGTCTCACATTGTCGCCATTTTCTCAACGGAAGGTGCCATGAGGGTGACAAGTGTCAGTTTTCACATGATGCAGTGCCTCTAACAAAATCCAAGCCATGTACTCATTTTGCTCGTCACTCTTGCATGAAAGGGGATGATTGCCCATTTGATCACCAGCTCTCAAAATATCCTTGTACCAATTTTGTGTCCAAAGGCTCTTGTTATAGAGGTGATGCTTGCTTGTTTTCTCACCAGGTACCAACCAAAGAAGATATCCCCACGCCTTCAAATATGAGCAGACCAGAATTGTCTCCACTTCTGTCAGGAAATGCAAATTCCAGCACACCACTTAACAACAATCATGGCTCTAGTTCTGTCCAGCAAAACCGCTTTACTAATTCTGCAGGAATTCATTCTTGCACCAGTGTTGAACATAAGGTGACAAACACTGTACAGAAACAGCCTACACCACCTAAAGGAATTAGTTTCATCAATCTTGCAAAATTATCACCCAGCCTTAGTTCACTGAAACAAGGCACAGTAACAACCAAGGAAAGTCCTGTACAAATTGGGACCCGTCAAGATCAAAGTGCATTTGACAAAACACAAAACAAGGTGGAGATTCCTAAGAAATTGCCAGCTGTGACACCTAAGGGAATAAACTTTCTTTCTTTTGGCAAAGGCTCTGTCTGCAGTTTTAAAAGTGCTATTCCTTCCGATGTGAATTGGGAAAATGGTATCAAGTTGCCCCAGTTACTCAATTTTGGTTTGCCTCAGCAGGCAAATTCCTCTCTAAATAAGGGTGATTACAACAAAGCTAGTGACAGAACAAAACAAAATGTACCACAGACTGATATGTTCTTAAATGAGATTTTAGGGAAAAATCAATTTGTGGCAGAAGGAACTACATCAAAGTTTCCAGAGAAAACCTCAGTAGATTCCTCTCTAAATAAGGGTGATTACAACAAAGCTAGTGACAAAACAAAACAAAATGTACCACAGACTGATATGTTCTTAAATGAGATTTTAGGAAAAAATCAATCTGTGGCAGAAGGAACTATATCAAAGTTTCCAGAGAAAACCTCGGTAGATGTTTTTATGTGGGATCACAGCCATAGTAAATCAGTTCAAGAGGGGAAAATGTCATCTGATAATTGTCAGAGTTCAAAAGGCCAAAAGGCACTCTTATCAACTTTAGCATTTGCAGCTGAGCATGAATCTGACATTAAGATGAAATGCCCTACTGGTGGTTTGCCGGTATGA | 2286 | 0.4068 | MEGNTAAFLVSESLRGARQLLPLSLSVFPSLPIAPKFLTLPKRQGEQGLRFSPKRHSQDNGNGRMDPENQEKERKCSEVVDSDFLDPKDPIHQKDIQEVQETIEGVGDKDMDFTSNKMVLDDIELMMGIEDMSTQANGFDKEQKLMNEFELVMKGTEDLICDSELIPLNLGLDEKHNDGGEVGLTDYQVEMEEGEISGDLGIDGNSFDVASADALILQQMEVDEVQKPENVTGNMIYPSKIENQEKETGYDSNSSLVNALQDANNSVQVEPRTSGKKGIACGVEVAISQKTIECQKEDKTKLDNASKKSTRGGNKGKKKKADRKKRAEKNKELGVKRLQLQHVQRPKVVSHCRHFLNGRCHEGDKCQFSHDAVPLTKSKPCTHFARHSCMKGDDCPFDHQLSKYPCTNFVSKGSCYRGDACLFSHQVPTKEDIPTPSNMSRPELSPLLSGNANSSTPLNNNHGSSSVQQNRFTNSAGIHSCTSVEHKVTNTVQKQPTPPKGISFINLAKLSPSLSSLKQGTVTTKESPVQIGTRQDQSAFDKTQNKVEIPKKLPAVTPKGINFLSFGKGSVCSFKSAIPSDVNWENGIKLPQLLNFGLPQQANSSLNKGDYNKASDRTKQNVPQTDMFLNEILGKNQFVAEGTTSKFPEKTSVDSSLNKGDYNKASDKTKQNVPQTDMFLNEILGKNQSVAEGTISKFPEKTSVDVFMWDHSHSKSVQEGKMSSDNCQSSKGQKALLSTLAFAAEHESDIKMKCPTGGLPV | 761 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo167g00045 | 761 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI | 189 | 760 | IPR045124 | GO:0003723|GO:0045892 | |
Pumo167g00045 | 761 | MobiDBLite | consensus disorder prediction | 311 | 325 | - | - | |
Pumo167g00045 | 761 | SUPERFAMILY | CCCH zinc finger | 347 | 371 | IPR036855 | GO:0046872 | |
Pumo167g00045 | 761 | SUPERFAMILY | CCCH zinc finger | 404 | 430 | IPR036855 | GO:0046872 | |
Pumo167g00045 | 761 | Gene3D | - | 377 | 439 | - | - | |
Pumo167g00045 | 761 | SMART | c3hfinal6 | 375 | 401 | IPR000571 | GO:0046872 | |
Pumo167g00045 | 761 | SMART | c3hfinal6 | 345 | 372 | IPR000571 | GO:0046872 | |
Pumo167g00045 | 761 | SMART | c3hfinal6 | 403 | 427 | IPR000571 | GO:0046872 | |
Pumo167g00045 | 761 | MobiDBLite | consensus disorder prediction | 44 | 74 | - | - | |
Pumo167g00045 | 761 | ProSiteProfiles | Zinc finger C3H1-type profile. | 375 | 402 | IPR000571 | GO:0046872 | |
Pumo167g00045 | 761 | Gene3D | - | 301 | 376 | - | - | |
Pumo167g00045 | 761 | MobiDBLite | consensus disorder prediction | 428 | 469 | - | - | |
Pumo167g00045 | 761 | ProSiteProfiles | Zinc finger C3H1-type profile. | 405 | 428 | IPR000571 | GO:0046872 | |
Pumo167g00045 | 761 | MobiDBLite | consensus disorder prediction | 430 | 469 | - | - | |
Pumo167g00045 | 761 | Pfam | CCCH-type zinc finger | 351 | 371 | IPR041367 | - | |
Pumo167g00045 | 761 | MobiDBLite | consensus disorder prediction | 296 | 310 | - | - | |
Pumo167g00045 | 761 | ProSiteProfiles | Zinc finger C3H1-type profile. | 346 | 373 | IPR000571 | GO:0046872 | |
Pumo167g00045 | 761 | MobiDBLite | consensus disorder prediction | 48 | 74 | - | - | |
Pumo167g00045 | 761 | MobiDBLite | consensus disorder prediction | 649 | 670 | - | - | |
Pumo167g00045 | 761 | MobiDBLite | consensus disorder prediction | 296 | 333 | - | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Pumo167g00045 | zf-CCCH_4 | 2.5e-06 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo167g00045 | - | - | gmx:100816509 | 1083.17 |