Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo166g00001 ATGGCCAAGATTACTGCTGCAGAAGCAGCACTGCTTCAGAGTATCCAAACGCTCATTCTCCTCCCTGTTTGTCATTACTGCGGTACCAAAGGGGAAGACACACGTCATGGTTTTACTGGGCATCTCTACAAAGCTCTTGATGGCAGGGGAATCCGCACTTTCATGGATGATGAGAAGCTTCAAAGAGGAGAGGAAATAACACCGGCACTTGTGAAGGCAATTCAAGAGTCCAGGATTGCCATCATTGTGCTCTCAAAAGACTATGCTTCTTCCTCATTTTGTTTACATGAACTTACAACTATCCTTGAGTGCCTTAAGGGAAAAGATCGGTTGGTTTTGCCGGTTTTTTATAAGGTAGATCCTTCTCATGTACGTCACCAGAAAGGTAGTTATGGAGATGCATTGGCTCGGCAGGAGAGCTTCAAAGCTGAGAAGGACAAGTTGGAGAAATGGAAGATGGCTCTGCATCAAGTTGCTAACTTGTCTGGCTACCATTTCAAAGACGGAGATGAATATGAATACAAGTTTGTTGAGAAGATTGTTGAGCAGGTCTCTAGCAAGATTAACCGTGTTCCTTTACATGTTGCGGAGTACCCGGTTGGACTTGAGTCACAAGTGCTAAAAGTAAGGAAGCTTTTGGATGTTGGATGTGATGATGGTGTCCACATGATCGGGATCCGCGGAATGGGCGGGATAGGAAAATCAACACTTGCTCGAGCTGTCTATAATAATTTAATTGCTGAGAATTTTGATGGTTTGTGTTTTCTAAAAAATGTAAGAGAAGAATCAAACAAACATGGATTAGAACACCTACAAAGAATCCTTCTTTCGAAAATACTTGTTGAGAAGGACATCAACTTTACATGTTGGGAAGAAGGAGCTTCAATGATACCACAAAAGCTCCATCAAAAGAAGGTTCTCTTGGTTCTAGATGATGTTGACAAGCCCGAGCAATTACAGGCAATTGCTGGAGGACGTAATTGGTTTGGTCCCGGCAGCAGAATCATCATCACAACTCGGGACAAACAATTGCTAGCATCTCATGAAGTTATTGAGATATATGAGGTGAAGGAATTGAACAAGAATGATGCACTTCAATTACTTACATGGAAAGCTTTTAAAAAGGAAAAAGCTGATCCAAGGTATGAGCAGGTCTTGAATCGTGTAGTAAAATATGCTTTTGGCCTTCCATTGGCTTTGGAAGTGATAGGTTCCAACTTGTTTGGAAAAAGTATTGAAAAATGGGAAGATGCCATAAATCAGTATGAAAGAAGTCTTCCTGATGGAATCCAAGGTATTCTTAAAGTAAGCTTTGATGCTTTGGACGAAGAAGGGAAGAGTGTTTTTCTTGACATTGCACGTTGCTTCAATGGATATGAATTGACAAAGGTTGAAGATATACTATGTGCTCATTATGGTCACAACATGAAACGTCATATTGACGTGTTGGCTGAAAAATCTTTCATGAATCTCAATTATTTTGATTATTCTAGAGTTACATTGCATGACTTGATTGAGCACATGGGTAAAGACATTGTAAGGCAGGAATCACTAGATGAACCAGAAGAGCGCAGTAGGTTATGCTCATGGGAAGATATAAAACAAGTTTTGGAAGACAATACTGGAACAAGTAAAATTAAAATCATATGTCTGGAATTCCCTATATTTAGCAAAGAAATGGTAGAATGGGGTGGAAAGGCATTCAAGAAGATGCAAAAGCTCAGAACACTCATTATTAAAAATGGTAATTTTTCCAAAGGTCCCAAATATCTTCCAAATAGTTTGAGAGTACTGGAATGGTGGGGATATCCTTCACATTGTTTACCATCTGATTTTCAAGGGAAGAAACTGAAGTTCGTGAATCTAAGGGTTTTGAATTTTAACGGGTGCGAATATTTAACACAGATACCTAATGTATCTGGTTCCCCAAATTTGGAGAAATTTTCATTTGAACAGTGTGATAAATTAGTTAAAGTTCACGAGTCGGTTGGTTCTCTTGGTAAACTAAAAATATTGAGTGCTTTTGGTTGCAACAAGCTTGAGAGTTTTCCATCCATCCATTTGACCTCTCTAAAAGAACTTGATCTTTCAGAGTGTTCAAGTCTTGAGAGCTTTCCAAAAATATTAGGAAAAATGGAAAACATAAGGGTACTTCTTTTGGTGAACACTCCGATAAAAGAATTGCCATTTTCATTTCACTATCTTATCCGACTCAAACATTTATCACTGTTTGGCTGTGGAAGTGTTCAGTTTCCAAGTAGCATTGTCATGATGCCAGAACTGACAAGCATTAATGCTTTGCATTTGAAAGAGTGGAAATGGATAAAACAGGAAGAGGATGAAGAAAATGTGGACTCAATAGTATCTTCGAAGCTATGCGGTCTTCGTGTCCCAGCGTGCAACCTGAATGATGATTTTTTTTCAATAGGTTTCATGCGGTTTGCTCGCGTGCAATATTTAATCCTATCGGGGAATAATTTCACAAGCCTTCCTAAATGCATCGAAGAATTTCATTCTTTACGGTGCCTTAATGTGAGTAATTGCAAGCAACTTCAGGAAATTGAAGGGGTTCCCCCAAACTTGAGACATTTTTATGCACGAAACTGTATATCCTTGACTTCCTCGAGTACAAGCATGTTCCTAAATCAGGAATCGCAATTGGCTCAAATCTATAGATTTTGTTTGCCTGGAATATGTATTCCAGAGTGGTTTGATCATGAAAGCAGGGGACCTTCAAGTTCTTTCTGGTTTCGTAATAAGCTCCCTAACAAAATTCTTTGTTTTCTAATTGCACCTGTGAAAGGGGTCCGTCCTCCTGTGGTGCTCATCAATGGCAAAGTTGATGAATCTTCCTTACATAGTGACAAGAAAACAGTGAGGATGGAAATGGATCATACATATCTTTCTGTTATAGATTTGAGATATTCTCTGTTTAAAGTGCCTTCAGAAAATGAATGGAACCATGTGGAGGTTACATATGCGGGTGCAGTAGAGACCTCAATTGTTAAAGCAAGCGGAATCCATGTAATCAAACATGAAAGCAGCACAGAAGATATTCTATTCACTGATCCTAACAAGAAGAGAAAATTAGATGATTATCTCAACAGCTTGGAATCATGA 3120 0.3901 MAKITAAEAALLQSIQTLILLPVCHYCGTKGEDTRHGFTGHLYKALDGRGIRTFMDDEKLQRGEEITPALVKAIQESRIAIIVLSKDYASSSFCLHELTTILECLKGKDRLVLPVFYKVDPSHVRHQKGSYGDALARQESFKAEKDKLEKWKMALHQVANLSGYHFKDGDEYEYKFVEKIVEQVSSKINRVPLHVAEYPVGLESQVLKVRKLLDVGCDDGVHMIGIRGMGGIGKSTLARAVYNNLIAENFDGLCFLKNVREESNKHGLEHLQRILLSKILVEKDINFTCWEEGASMIPQKLHQKKVLLVLDDVDKPEQLQAIAGGRNWFGPGSRIIITTRDKQLLASHEVIEIYEVKELNKNDALQLLTWKAFKKEKADPRYEQVLNRVVKYAFGLPLALEVIGSNLFGKSIEKWEDAINQYERSLPDGIQGILKVSFDALDEEGKSVFLDIARCFNGYELTKVEDILCAHYGHNMKRHIDVLAEKSFMNLNYFDYSRVTLHDLIEHMGKDIVRQESLDEPEERSRLCSWEDIKQVLEDNTGTSKIKIICLEFPIFSKEMVEWGGKAFKKMQKLRTLIIKNGNFSKGPKYLPNSLRVLEWWGYPSHCLPSDFQGKKLKFVNLRVLNFNGCEYLTQIPNVSGSPNLEKFSFEQCDKLVKVHESVGSLGKLKILSAFGCNKLESFPSIHLTSLKELDLSECSSLESFPKILGKMENIRVLLLVNTPIKELPFSFHYLIRLKHLSLFGCGSVQFPSSIVMMPELTSINALHLKEWKWIKQEEDEENVDSIVSSKLCGLRVPACNLNDDFFSIGFMRFARVQYLILSGNNFTSLPKCIEEFHSLRCLNVSNCKQLQEIEGVPPNLRHFYARNCISLTSSSTSMFLNQESQLAQIYRFCLPGICIPEWFDHESRGPSSSFWFRNKLPNKILCFLIAPVKGVRPPVVLINGKVDESSLHSDKKTVRMEMDHTYLSVIDLRYSLFKVPSENEWNHVEVTYAGAVETSIVKASGIHVIKHESSTEDILFTDPNKKRKLDDYLNSLES 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo166g00001 1039 Gene3D - 358 442 IPR042197 -
Pumo166g00001 1039 FunFam Disease resistance protein (TIR-NBS-LRR class) 26 190 - -
Pumo166g00001 1039 Gene3D - 26 188 IPR035897 -
Pumo166g00001 1039 Gene3D Ribonuclease Inhibitor 704 894 IPR032675 -
Pumo166g00001 1039 PRINTS Disease resistance protein signature 686 702 - -
Pumo166g00001 1039 PRINTS Disease resistance protein signature 393 407 - -
Pumo166g00001 1039 PRINTS Disease resistance protein signature 223 238 - -
Pumo166g00001 1039 PRINTS Disease resistance protein signature 300 314 - -
Pumo166g00001 1039 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 869 IPR044974 GO:0006952
Pumo166g00001 1039 Pfam TIR domain 27 189 IPR000157 GO:0007165
Pumo166g00001 1039 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 164 IPR035897 -
Pumo166g00001 1039 SUPERFAMILY "Winged helix" DNA-binding domain 429 538 IPR036390 -
Pumo166g00001 1039 SMART till_3 26 161 IPR000157 GO:0007165
Pumo166g00001 1039 Pfam NB-ARC domain 203 433 IPR002182 GO:0043531
Pumo166g00001 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 452 IPR027417 -
Pumo166g00001 1039 SUPERFAMILY L domain-like 563 903 - -
Pumo166g00001 1039 Gene3D Ribonuclease Inhibitor 558 703 IPR032675 -
Pumo166g00001 1039 ProSiteProfiles TIR domain profile. 21 188 IPR000157 GO:0007165
Pumo166g00001 1039 Gene3D - 189 354 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo166g00001 38 765 WRKY Transcription Factor Family AT4G12020 30.260 1.79e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo166g00001 - - gmx:100780257 1212.21