Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo164g00006 ATGTTGCCCTTTTCATATGCTAGGACTGATTCTGAACTCATTAAGGAAATTGTTCGAGATGTTTTGACAGTTTTGCAAAACCTGAGTCCTAGATTCCCAAACCAACTTGAGGATCTGGTTGGAATTGAGGACAATTGTGAACAGATTGAATCATTGCTAAAAAGTGGGTCAGGTGATGTTAGAACCATTGGAATATGGGGCATGGGTGGCATAGGAAAGACCACCCTTGCTACTGCTTTATATGCCAAACTGTCTTATGAGTTTGATGCTACTTGTTTCCTCGAAAAGGTAAGGGAAAAATCAGACACGCGTGGACTCGAAGCTTTACGTAATGAACTTTTTTCTAATTTGTTAGAGGAAGAAAATCATCGTTTTGGAGCACCCTTATTAGTACCCCATTCTGTCACGCGTAGGCTTGGACGTAAAAAAGCTTTGATTGTGTTGGATGATGTGGATACTGTAGAGCAATTAGATTCTCTAACTAAATATCGTGGCTTGGGACCCGGAAGTAGAATCGTTGTTACAACTAGAAATAAGCAAATATTTCACAAAAATGTTGAAGTATATCAGGTGAAGGAATTGAGTTTGCATCACTCTATCCAGCTTTTTAGTTTGACTGTTGTTGGACAAGAACAACCTGAAGATGGATATGAAGATCTATCAAGAAAAGCAGTTTCCTATTGCAATGGTAATCCTTTGGCTTTAATAGTTTTGGGTGCTAGTCTTCGACAAAGAAGTAAAGAGGTATGGAATAGTGAATTTGAGAAATTCCAACAGGCTCAAAATATGAAAATTTATGACATATTAAAATCAAGTTATGATGACTTAGAACCTTCTGAAAAGGACATCTTTTTAGACATTGCATGCTTCTTCAAAGGAGAAACCAGAGATTTTGTAACAAATCTACTGGATGCTTCAAATTTCTATGCAACATCTGGGATAAAAGTCCTTTTGGATAAAGCTCTCATAACAATTTCATATTACAACAGAATAGAAATGCATGACTTGATACAACAAATGGGTCAAGAAATTGTTCGTCAAGAATCCTTCAAAGACTCTGGAAGACGAACTCGATTATGGAAACATGAAGAAGTACATGAAGTATTGAAAAATAACAGGGGAACTCATGTTGTCGAAGGCATAATATTAGATTTGGATACATTAATTGGGGATCTATGTTTGAGTTTTGATTCCCTAGCAAAGATGACTAACATGAGATTTCTTAAAATCTATAGAAGGGGAAGTAATGATGGATTTAATGTGTACTTTCCTAATGGTGTCGAGTCATTGTCTTATAAATTGAGGTACCTTCGTTGGGATGGATGTTGTCTTGAGTCTTTGTCGTCTAACTTTTGTGCTGAACAGCTTGTAGAGCTTCACATGCCTTTTAGCAAGGTTAAAAAGCTTTGGGATGGTGTCCAGAATGTTGTAAATTTGAAGACAATTTACCTTTGGGGCTCCAGAGACCTGATTGAGATCCCAGACTTATCCAAGGTAGAAAAACTTGAATTTGTTTATCTTAGTGGATGTGAAAGCTTGCATGAGCTCCATCCATCCATGTTATCTCTCCAAAATCTTAGACAATTGTTTTTAAATGGATGCAGAGGGATTGAAAGCCTTAATGTTCATTCAAAATCTCTTAAAAACCTGTGGGCCATTAATTGTTCATCTCTCCAGGAATTCTTAATAGGATCCATTACAGCACCAGACCATTATGAACGCATGCAGCACGATGCATCAGAATTGTCTTTAGAAGAGTTGTTTCTATCCCAAACTAATGTTGAGAGCTTGCCTGCAAACATAAAAAATCTTTCATCGTTGAGACACCTTTCGTTACGTGACTGCAGTAAACTTGTGTCTCTGCCGGAGCTTCCACTATCCCTACCAAAGCTTCACTTAAGTGGTTGCAATAAACTTGTGTCTCTGTCGCAGCTTCCACCATCCCTAATACAGCTTTCCTTACTTGGTTGCAGTAATCTTGAGTCTCTGCTAAAGCTTCCACCATCCCTAATAGAGCTTCACTTGAATGGTTGTAGTAAACTTGTGTCTCTGTCGGATCTTCCACTATCCCTAACAGAGCTTGACTTATATGGTTGCAGTAAACTTATGTCTCTGCCGGATCTTCCACAATCCCTAACATGGCTTCACTTGAATGGTTGTAGTAAACTTGTGTCTCTGCCGGAGCTCCCAACATTGTTGAAAGAGGTGAGCGCCCAAAACTGCACTTCTCTGGATACAGACTCCACTCAACGGCTAGTGTTACAACACATGCTTCAGAGGCTCATACCCAACCGTAACTCTGAGTATTACTATAGGCATTTCATTTTCCCGGGAGACCATGTGACTGACGAGCGTGGGTTTCGTACAGCAAGGAGTTCAATAACTATTCCTTATCTCTCACTCCCTCCATCATGTCTCTTGCACGCTTTCATTTATTGTGCCATTCTTCCTAAGGGATTTTGCCATGATATTAGTCATTCTGTCATGTGTTCTATCTATCAAGATGGTAAACAGGTTGGCTGGGATAGCAACAAATCAATTTCCAAAAATTTGATTTCAGAGCACGTGTTATTTTCGTATGTTAAAATAGAGTTCCACGTTCACAGTGACGACTTACCATTTATATTAGAATTTTATTACCAAGACAAACACCACCAAGTGAGCATAAAAGAGTTTAGGGTCTTCCCAGTATATGCCTCAGAATCGGGGTTGAAGCTGTTTGAGTTTGATAGTAGTAGCAAGGAAATTTTTGAATCAGAATCCATTACTGAAATCTTTGATGATGAGTCACACCCCAGAGGAATTGGAGCTGGAAGCTCTACTAATGGAAATGAAAATGACAGAGGAATTGGAGTTGGAAGCTCTACTAATGAAAATGAAAATGAATGGGAACAACTTCTCAATCCATTATCGGTATGA 2919 0.3875 MLPFSYARTDSELIKEIVRDVLTVLQNLSPRFPNQLEDLVGIEDNCEQIESLLKSGSGDVRTIGIWGMGGIGKTTLATALYAKLSYEFDATCFLEKVREKSDTRGLEALRNELFSNLLEEENHRFGAPLLVPHSVTRRLGRKKALIVLDDVDTVEQLDSLTKYRGLGPGSRIVVTTRNKQIFHKNVEVYQVKELSLHHSIQLFSLTVVGQEQPEDGYEDLSRKAVSYCNGNPLALIVLGASLRQRSKEVWNSEFEKFQQAQNMKIYDILKSSYDDLEPSEKDIFLDIACFFKGETRDFVTNLLDASNFYATSGIKVLLDKALITISYYNRIEMHDLIQQMGQEIVRQESFKDSGRRTRLWKHEEVHEVLKNNRGTHVVEGIILDLDTLIGDLCLSFDSLAKMTNMRFLKIYRRGSNDGFNVYFPNGVESLSYKLRYLRWDGCCLESLSSNFCAEQLVELHMPFSKVKKLWDGVQNVVNLKTIYLWGSRDLIEIPDLSKVEKLEFVYLSGCESLHELHPSMLSLQNLRQLFLNGCRGIESLNVHSKSLKNLWAINCSSLQEFLIGSITAPDHYERMQHDASELSLEELFLSQTNVESLPANIKNLSSLRHLSLRDCSKLVSLPELPLSLPKLHLSGCNKLVSLSQLPPSLIQLSLLGCSNLESLLKLPPSLIELHLNGCSKLVSLSDLPLSLTELDLYGCSKLMSLPDLPQSLTWLHLNGCSKLVSLPELPTLLKEVSAQNCTSLDTDSTQRLVLQHMLQRLIPNRNSEYYYRHFIFPGDHVTDERGFRTARSSITIPYLSLPPSCLLHAFIYCAILPKGFCHDISHSVMCSIYQDGKQVGWDSNKSISKNLISEHVLFSYVKIEFHVHSDDLPFILEFYYQDKHHQVSIKEFRVFPVYASESGLKLFEFDSSSKEIFESESITEIFDDESHPRGIGAGSSTNGNENDRGIGVGSSTNENENEWEQLLNPLSV 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo164g00006 972 SUPERFAMILY "Winged helix" DNA-binding domain 264 370 IPR036390 -
Pumo164g00006 972 SUPERFAMILY L domain-like 392 745 - -
Pumo164g00006 972 Gene3D - 194 277 IPR042197 -
Pumo164g00006 972 Gene3D - 25 191 IPR027417 -
Pumo164g00006 972 Pfam NB-ARC domain 46 274 IPR002182 GO:0043531
Pumo164g00006 972 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 640 IPR044974 GO:0006952
Pumo164g00006 972 Pfam Leucine Rich Repeat 455 474 IPR011713 -
Pumo164g00006 972 MobiDBLite consensus disorder prediction 935 972 - -
Pumo164g00006 972 PRINTS Disease resistance protein signature 62 77 - -
Pumo164g00006 972 PRINTS Disease resistance protein signature 602 618 - -
Pumo164g00006 972 PRINTS Disease resistance protein signature 138 152 - -
Pumo164g00006 972 PRINTS Disease resistance protein signature 228 242 - -
Pumo164g00006 972 MobiDBLite consensus disorder prediction 928 972 - -
Pumo164g00006 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 287 IPR027417 -
Pumo164g00006 972 SMART LRR_bac_2 625 645 - -
Pumo164g00006 972 SMART LRR_bac_2 667 687 - -
Pumo164g00006 972 SMART LRR_bac_2 604 624 - -
Pumo164g00006 972 SMART LRR_bac_2 688 708 - -
Pumo164g00006 972 SMART LRR_bac_2 709 729 - -
Pumo164g00006 972 Gene3D Ribonuclease Inhibitor 582 757 IPR032675 -
Pumo164g00006 972 Gene3D Ribonuclease Inhibitor 371 578 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo164g00006 40 757 WRKY Transcription Factor Family AT5G45050 33.333 9.14e-98 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo164g00006 - - gmx:100813283 865.529