Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo164g00005 ATGGCTGAGCAACAAATGATAAGTGCTTCTGCTTCTTCCTCTAACTCTTCTTCTACGGTGTCTTGTAAAAGACATGATGTTTTTCTAAGCTTTCGAGGAGAGGACACCCGCAATAACTTCACAAGCCATCTTTATAAAGCTTTGAATCAAAAGAAAATTGAAACATTCATAGATGACCAGCTTGAAAAGGGAGATGAAATCTCACCAACACTCATCAAAGCCATCGAAGATTCTCATGTATCTGTTGTCATCCTCTCGGAGAACTATGCTTCCTCAAAGTGGTGCTTGGAAGAACTCAGCAAGATTCTGGAATGCCAGAAAAACCAAGGACAGATGGTGATACCTGTATTCTATAACATAGATCCATCTCATGTGAGGAAGCAGACTGAGAGCTATGAGCAAGCCTTTGCAAAACACGAGGGAGATCACAGGTGCAGCAAATGGAAAATGGCTCTCACTGAAGTAGCCAATTTAGCTGGATGGGACTCCCGAAACAGAATTGAATCTGAACTCCTTGAGGGCATTGTTGGAGACATTTTGCAAAAATTGAGTTCTAGATACCCAAACCAACTTGAAGGACTGGTTGGAATTGAGGACAATTATGAACAGATTAAATCATTACTAAAAATTGGGTCAAGTGATGTTAGAACACTTGGAATATGGGGCATGGGTGGCATAGGAAAGACTACCCTTGCTATTGCTTTGTGTGCCAAATTGTTTCGTGAGTTTGATGTTAGTTGCTTCCTGGAAAATGTAAGGGAAAATTCAAGCAGGCATGATGGACTTGAAGCTTTACATAATAAACTTCTTTCTCAGTTGTTGGAGAGTGAAAATCATCATTTTGAAGCACCCTTTCTTGTACCTGGTTTTGACATGCATAGGCTTGGACGTAAAAAAGTTTTGCTTGTGTTGGATGATGTGGATACCACAGAACAATTAGAATCTCTAATTAAATATTGTGGTTTTTTCGGACCAGAAAGTAGAATTATTGTTACAACTAGAAATAAGCAAATATTTCATGAAGATGTTAAAGTATATGAGGTCAAGGAATTGAGTTTTCATCACTCTCTTCATCTTTTCTGTATGGCTGCTTTTGGAGAAGGGCAACCAAAACATGGATATGAAGATCTATCAAGAAGAGCAATTTCCTATTGCAAAGGTAGTCCTTTGGCTTTAAAAGTTTTGGGTGCTAGTCTTCGTCGAAGAAGTAAAGAGGCATGGAAAAGTCAATTTGAGCAATTCCAACTGACTCAAAATATGAAAATTCATAACATATTAAAATCAAGTTTTCATGACTTAGAACCTTCTGAAAAAGACATCTTTTTAGACATTGCATGCTTCTTCAAAGGAAAAGAAAGAGATTCCATAACAAATATACTGGAAGCTTCGAATTTCTTTGCTGCATCTGGGATAGAAGTTCTTTTGGATAAAGCTCTCATAACAATTTCAAACTACAATATGATAGAAATGCATGACTTGATACAGCAAATGGGTCAGGAAATTGTTCATCAAGAATCCATCAAAGACCCTGGAAGACGAAGTCGATTATGGGAACCTGAAGAAGTTCAAGAAGTATTGAAATATAACAGGGTAAGTGGGAACTGA 1605 0.3776 MAEQQMISASASSSNSSSTVSCKRHDVFLSFRGEDTRNNFTSHLYKALNQKKIETFIDDQLEKGDEISPTLIKAIEDSHVSVVILSENYASSKWCLEELSKILECQKNQGQMVIPVFYNIDPSHVRKQTESYEQAFAKHEGDHRCSKWKMALTEVANLAGWDSRNRIESELLEGIVGDILQKLSSRYPNQLEGLVGIEDNYEQIKSLLKIGSSDVRTLGIWGMGGIGKTTLAIALCAKLFREFDVSCFLENVRENSSRHDGLEALHNKLLSQLLESENHHFEAPFLVPGFDMHRLGRKKVLLVLDDVDTTEQLESLIKYCGFFGPESRIIVTTRNKQIFHEDVKVYEVKELSFHHSLHLFCMAAFGEGQPKHGYEDLSRRAISYCKGSPLALKVLGASLRRRSKEAWKSQFEQFQLTQNMKIHNILKSSFHDLEPSEKDIFLDIACFFKGKERDSITNILEASNFFAASGIEVLLDKALITISNYNMIEMHDLIQQMGQEIVHQESIKDPGRRSRLWEPEEVQEVLKYNRVSGN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo164g00005 534 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 526 IPR044974 GO:0006952
Pumo164g00005 534 Gene3D - 351 434 IPR042197 -
Pumo164g00005 534 PRINTS Disease resistance protein signature 217 232 - -
Pumo164g00005 534 PRINTS Disease resistance protein signature 385 399 - -
Pumo164g00005 534 PRINTS Disease resistance protein signature 294 308 - -
Pumo164g00005 534 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 161 IPR035897 -
Pumo164g00005 534 Gene3D - 20 183 IPR035897 -
Pumo164g00005 534 Gene3D - 184 347 IPR027417 -
Pumo164g00005 534 Pfam TIR domain 25 194 IPR000157 GO:0007165
Pumo164g00005 534 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 185 - -
Pumo164g00005 534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 444 IPR027417 -
Pumo164g00005 534 ProSiteProfiles TIR domain profile. 23 183 IPR000157 GO:0007165
Pumo164g00005 534 SMART till_3 24 158 IPR000157 GO:0007165
Pumo164g00005 534 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Pumo164g00005 534 Pfam NB-ARC domain 200 427 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo164g00005 21 526 WRKY Transcription Factor Family AT4G12020 32.809 1.01e-73 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo164g00005 - - gmx:100813283 754.207