Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo161g00019 ATGGACATTAGCGGGAACCCACGGGCTTTGAGGAGGTTGAGAAGTGCGTGCGAGAGGGCAAAAAGGACACTATCCTGTGCACTGACTACCAACATTGAGATAGATGCTTTGTTTCAAGGCATTGACTTCTGTTCTTCAATCACTCGAGTAAAGTTTGACGAAATCAACATGGAGCTCTTTCAAGAGTGTATGGAGACAGTACAAAGGTGTCTTACTGATGCTAAAATGGACAAGAGCAATGTGCATGATGTTGTTCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGCAGTTATTGCAGGACTTCTTCAATGGAAAGGATCTGCGCAAGAGCATCAACCCTGACGAGGCTGTTGCATACGGTGCAGCTGTGCAGGCTGCTATGTTAAGTGATGGCACTAAGAATGTTCCAGACTTGGTGCTGTTGGATGTTTCACCGCTGTCACTTGGTTGGAAATTAGTAGGAGATATCAAGGGTGTTGTGATTCCTAGAAATACAACTATTCCTGTAAAAATAACAAAATCATATGTTACAGTTTTTGATAACCAAACATCTGTTAATATTGATGTTTACGAGGGCGAGAGACCAATAGCAAGCAGTAACAATATGCTGGGTTCTTTCACGCTCTTTGGACTTCCTCCAGCTCCACGCGGCCTTCCTTTTGATGTGTGCTTCGCCATAGATGAAAACGGTATCCTATCTGTTTCTGCTATGGAAAGAACCACTGGCAATTGGAACAAGATGACCATAACCAATCCCGTTGGAAGACTGTCATCAGAAGAAATTAAAAGAATGATTCAAGAAGCGGAGAAATACCAAGCTGAAGATAGGAAATTCCTTAGGAAGGCCAAGGCGATGAATGCTTTGGATGATTATGTTTACAAGATAAGGAATGTTTTAAAAAACATGTATATCAGGTTGAAGCTTTCCTCACAGGAAAGAGAGAAGATCCATTCTGCAATTACTAAGGCAAGGAATTTGCTCGAGGGTAAGAACCAGCAGGACCAAGTAGATGTGTTTGAGGATTGTCTAAAGGAGCTCGTGAGTCTCTTTTCACTCCTCATAGGCAAGTTTGGTTAG 1083 0.4247 MDISGNPRALRRLRSACERAKRTLSCALTTNIEIDALFQGIDFCSSITRVKFDEINMELFQECMETVQRCLTDAKMDKSNVHDVVLVGGSSRIPKVQQLLQDFFNGKDLRKSINPDEAVAYGAAVQAAMLSDGTKNVPDLVLLDVSPLSLGWKLVGDIKGVVIPRNTTIPVKITKSYVTVFDNQTSVNIDVYEGERPIASSNNMLGSFTLFGLPPAPRGLPFDVCFAIDENGILSVSAMERTTGNWNKMTITNPVGRLSSEEIKRMIQEAEKYQAEDRKFLRKAKAMNALDDYVYKIRNVLKNMYIRLKLSSQEREKIHSAITKARNLLEGKNQQDQVDVFEDCLKELVSLFSLLIGKFG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo161g00019 360 FunFam heat shock 70 kDa protein 14 1 62 - -
Pumo161g00019 360 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 134 287 IPR029047 -
Pumo161g00019 360 Gene3D - 288 359 IPR029048 -
Pumo161g00019 360 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 286 358 IPR029048 -
Pumo161g00019 360 Gene3D Actin; Chain A, domain 4 2 62 - -
Pumo161g00019 360 FunFam Heat shock 70 kDa protein 133 287 - -
Pumo161g00019 360 ProSitePatterns Heat shock hsp70 proteins family signature 3. 84 98 IPR018181 -
Pumo161g00019 360 SUPERFAMILY Actin-like ATPase domain 2 131 IPR043129 -
Pumo161g00019 360 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 136 291 IPR029047 -
Pumo161g00019 360 Gene3D - 63 110 - -
Pumo161g00019 360 Gene3D - 111 125 - -
Pumo161g00019 360 PANTHER HEAT SHOCK PROTEIN 70KDA 2 324 IPR013126 GO:0005524|GO:0140662
Pumo161g00019 360 Pfam Hsp70 protein 1 339 IPR013126 GO:0005524|GO:0140662
Pumo161g00019 360 PRINTS 70kDa heat shock protein signature 139 158 - -
Pumo161g00019 360 PRINTS 70kDa heat shock protein signature 81 97 - -
Pumo161g00019 360 PRINTS 70kDa heat shock protein signature 219 235 - -
Pumo161g00019 360 PRINTS 70kDa heat shock protein signature 113 133 - -
Pumo161g00019 360 FunFam Heat shock cognate 70 kDa protein 2 63 110 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo161g00019 2 359 Calmodulin-binding Proteins AT3G12580 61.667 2.77e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo161g00019 K03283 - gmx:102667572 478.789