Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo161g00013 ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGGACTTCCATTTCATCAGATCCTGGAGGGGATTGTACCACAAAAAGAGTGAAGTTTGATCAAGAGACTGAAGGAAAGGTCAATGAGGAAACATATCCTAATGAGCAGCATGTAGTTGCATCAAAAGAAAGTGTTAATTCTAATGTTCCTGCAGTTGCTAGAACTGAGAAGTCAGGTTATGATCAGCTTCCAAAAGAATTAAACGAAATGAAAATTGGAGATGACAAAGGCAAAAACAACAATGAGAAGGATATGGAAGCAACTATTGTGAATGGTAATGGAACAGAAACGGGCCAAATAATTACAACCGCTATTGGTGGTCGAGATGGACAACCAAAGCGGATAATCTCATACATGGCAGAACGTGTGGTTGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGCCTTGAAACTGGTGAAGCAGTTGCAATAAAAAAAGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTGCAGGTTATGCGTATGCTTGACCATACTAATGTTCTCAGATTAAAGCACTGTTTCTATTCAACGGCTGAGAAAGATGAGTTGTACCTTAACCTAGTTTTGGAGTATGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATATCAGAATGCACCAACATATGCCTATCATTAATGTGCAACTGTATACATACCAGATATGCCGGGGTTTAAATTATTTGCATAATGTGATCGGAGTCTGTCATCGGGACATCAAACCCCAGAATCTATTGGTTAATCCCCAGACTCATCAGTTAAAAGTATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGCGAACCCAACATATCATACATATGCTCGCGGTATTATAGAGCTCCAGAACTTATATTTGGTGCAACAGAATACACCACTGCTATTGATATTTGGTCTGCTGGTTGTGTGTTGGCTGAGCTTCTTCTAGGACATCCAATGTTTCCCGGAGAGAGTGGGGTTGATCAGTTGGTAGAGATCATTAAGATCTTGGGAACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTTAAGTTTCCTCAGATAAAAGCACACCCATGGCATAAGGTTTTTCACAAGAAGATGCCTTCAGAAGCAGTGGATCTAGTGTCAAGGATGCTTCAGTATTCACCAAATCTACGATGCACTGCTTTGGAAGCATGTGCACACCCTTTCTTTGATGATCTGCGAGAACCAAATGCATGCTTGCCAAATGGGCGACCACTGCCTCCATTGTTCGATTTCACTGCTCAAGAACTGGCGGGCGCGCCCGATGAGTTGCGTCGACGTCTCATTCCTGAGCATGCAAGAAGTTGA 1383 0.4172 MNMMRRLKSIASGRTSISSDPGGDCTTKRVKFDQETEGKVNEETYPNEQHVVASKESVNSNVPAVARTEKSGYDQLPKELNEMKIGDDKGKNNNEKDMEATIVNGNGTETGQIITTAIGGRDGQPKRIISYMAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDKRYKNRELQVMRMLDHTNVLRLKHCFYSTAEKDELYLNLVLEYVPETVYRVSKHYIRMHQHMPIINVQLYTYQICRGLNYLHNVIGVCHRDIKPQNLLVNPQTHQLKVCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLLGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPSEAVDLVSRMLQYSPNLRCTALEACAHPFFDDLREPNACLPNGRPLPPLFDFTAQELAGAPDELRRRLIPEHARS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo161g00013 460 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo161g00013 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Pumo161g00013 460 Gene3D Phosphorylase Kinase; domain 1 116 210 - -
Pumo161g00013 460 MobiDBLite consensus disorder prediction 1 28 - -
Pumo161g00013 460 CDD STKc_GSK3 129 418 IPR039192 -
Pumo161g00013 460 SUPERFAMILY Protein kinase-like (PK-like) 130 440 IPR011009 -
Pumo161g00013 460 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 95 459 - -
Pumo161g00013 460 MobiDBLite consensus disorder prediction 9 23 - -
Pumo161g00013 460 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo161g00013 460 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo161g00013 460 Gene3D Transferase(Phosphotransferase) domain 1 211 459 - -
Pumo161g00013 460 ProSitePatterns Protein kinases ATP-binding region signature. 137 161 IPR017441 GO:0005524
Pumo161g00013 460 FunFam Shaggy-related protein kinase kappa 211 459 - -
Pumo161g00013 460 FunFam Glycogen synthase kinase-3 beta 115 210 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo161g00013 137 424 Core Cell Cycle Gene Families AT1G76540 35.333 2.37e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pumo161g00013 Pkinase 1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo161g00013 K00924 - gmx:100786458 908.286