Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo152g00003 ATGTTTCCTAGAACTTTTGCCCAAAAGCTGTATCAGAACTTCAAAAACCATATAAGGTTTAGCAAGCCTGAATTATCACGAAGTGACTTCACAATTTGCCATTATGCTGGAGATGTCACTTATCAAACTGAATTGTTCCTCGACAAGAACAAGGATTATGTTGTTGCTGAGCACCAGGCACTTCTTTATGCTTCCAAATGCCCCTTTGTATCGGGCTTGTTTCCCCCTTCACCCGAAGAATCTTCTAAACAATCAAAGTTCTCTTCAATTGGTTCACAATTTAAGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCTGGGTATCCTACTAGAAAAACCTTTGATGAATTTGTGGATCGATTTAGCCTTCTTGCACCAGAAGCTTTGGATGGAAGTTCTGATGAGGTCACTACTTGCAAGAGAATTCTAAAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAGACAAAGGTGTTTCTTCGAGCTGGTCAGATGGCAGAACTAGATACCTGTAGAAGTGAAATCTTAGGAAGGTCAGCAAGCATTATTCAGAGAACAGTTCGTTCCTATGTGGTCCGCCAAAGTTTCATCTTGCTTCGGTTGTTTGCTGTGCAGATCCAAGCTACGTGCAGAGGACAACTTGCTCGGCAAGTTTATGAGGGAATGCGGCAGGAGGCTTCTAGTTTGGTGATTCGGAGGTGCTTCCGCATGCATATTGCTAGGAAGGCATACAAAGATTTGTATACCTCTGCTGTCTCTATCCAGACTGGTATGCTGGGGATGGCTGCTCGTTGTGAGCTACACTTTAGAAGGCGGACTAAAGCAGCAATTGTCATTCAGAGCCACTGCCGGAAATACTTGGCACAACTTCATTTCACAGAATTAAAGAAGGCAGCAATTACAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAATTGCGAAAGCTCAAGATGGGACCTGCTCAGGCGCAGAATTTGCGGGACTCGCTTGCCGATGCAAAGTCTGATATTGTGGTTAAGGTTGGGCTCAGGAAAGGTTCTCGTTCCTTTAATGAGGCTCGTGCAACTGGCTTTAGTGAGGAGAATGGAACTCTGGGTGACATATGGGAAACTATCTCAGGCAGTGATCTTGTGTTGCTGTTGATTTCTGATTCTGCACAGGCAGATAATTATGAAAAAATATTTTCCCACATGAAGTCAAATAGCATACTTGGGCTGTCCCATGGTTTTCTTCTTGGGCATTTACAGTCAATGGGACTTGATTTTCCCAAGCACTTCAGTGTAATTGCTGTATGCCCGAAAGGTATGGGTCCTTCTGTAAGGAGGCTGTATGTCCAAGGCAAAGAGATAAATGGTGCTGGAATTAATTCAAGTTTTGCAGTCCACCAGGATGTGGATGGCAGAGCTACTGATGTTGCTTTGGCATGGTCTGTTGCCCTTGGTTCCCCTTTTACATTTGCCACTACATTAGAGATGGAATACAGGAGCATTTTACTTGGTGCTGTTCATGGTATTGTGGAATCCTTGTTTAGGAGGTACACTGAACATGGAATGAGTGAAGATTTGGCTTATAACAACACTGTCGAGTCCATTACAGGAACTATATCTAAAATCATCTCGACCAAGGGCATGCTGGCTGTATACAATGCTTTATCTGAAGACGAAAAAAGGGAATTTGAGAAAGCATATAGTGCTTCATATTATCCCTGCATGGACATTTTGTATGAGTGCTATGAGGATATTGCTGCTGGCAGTGAGATTCGCAGTGTTGTCTTGGCTGGGCGTCGCTTTTATGAGAAAGAGGGTCTGCCAGCTTTTCCCATGGGTAAGATTGATCAGACCCGGATGTGGAAGGTTGGTGAGCGTGTCCGATCTACAAGGCCAACAGGTGATCTAGGCCCATTATACCCATTTACTGCTGGGGTCTACGTGGCATTGATGATGGCCCAGATTGAGATCCTGAGGAAGAAGGGGCATTCTTACTCTGAAATCATTAACGAGAGTGTCATTGAGTCTGTTGATTCTTTGAATCCTTTCATGCATGCTCGTGGTGTTTCTTTCATGCAAGGTTGGGTTCAAGGAAATGGGCTCCTCGATTTGATTCAGACAAAACCAAAACTTACATTGACTAATCCTAAGGAACCTGAATTTGAGACATCTCAGCGGATTCGGCCAGCTAGGGTGAAGAGTAGTGCTGAGCTTGAGGAAGAAATGATGGCTAAATTGCCAAAATTCAAGGCTCGACCATTGAATAAGAAGATTTTGCAAACTGCAACTTTGCCTCCTGTTCCAAGAAGTACACCAAAGCTACCGGAGTTTAAGGAATTTCATCTGGAAACTTTGGCTAGGGCCCATCAGAATGCAGATACAGCTTCAATAGCTTCAACAGAGGTGTCTCATCATAAGGTAGGTATCTTTCAGAAACAACTGATTCAACTATTCATTTTCACTTCGATCCATTAG 2469 0.4362 MFPRTFAQKLYQNFKNHIRFSKPELSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSQFKGVMEAIRISCAGYPTRKTFDEFVDRFSLLAPEALDGSSDEVTTCKRILKNVGLEGYQIGKTKVFLRAGQMAELDTCRSEILGRSASIIQRTVRSYVVRQSFILLRLFAVQIQATCRGQLARQVYEGMRQEASSLVIRRCFRMHIARKAYKDLYTSAVSIQTGMLGMAARCELHFRRRTKAAIVIQSHCRKYLAQLHFTELKKAAITTQCAWRGKVARRELRKLKMGPAQAQNLRDSLADAKSDIVVKVGLRKGSRSFNEARATGFSEENGTLGDIWETISGSDLVLLLISDSAQADNYEKIFSHMKSNSILGLSHGFLLGHLQSMGLDFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALAWSVALGSPFTFATTLEMEYRSILLGAVHGIVESLFRRYTEHGMSEDLAYNNTVESITGTISKIISTKGMLAVYNALSEDEKREFEKAYSASYYPCMDILYECYEDIAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPTGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMQGWVQGNGLLDLIQTKPKLTLTNPKEPEFETSQRIRPARVKSSAELEEEMMAKLPKFKARPLNKKILQTATLPPVPRSTPKLPEFKEFHLETLARAHQNADTASIASTEVSHHKVGIFQKQLIQLFIFTSIH 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo152g00003 822 Pfam Myosin head (motor domain) 5 86 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo152g00003 822 Pfam Myosin head (motor domain) 93 161 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo152g00003 822 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 319 488 IPR036291 -
Pumo152g00003 822 ProSiteProfiles KARI C-terminal domain profile. 487 632 IPR000506 GO:0004455|GO:0009082
Pumo152g00003 822 ProSiteProfiles KARI N-terminal domain profile. 290 490 IPR013116 -
Pumo152g00003 822 ProSiteProfiles IQ motif profile. 272 301 IPR000048 GO:0005515
Pumo152g00003 822 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 497 701 IPR008927 -
Pumo152g00003 822 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 497 630 IPR000506 GO:0004455|GO:0009082
Pumo152g00003 822 ProSiteProfiles IQ motif profile. 199 228 IPR000048 GO:0005515
Pumo152g00003 822 PANTHER KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL 321 662 IPR013023 GO:0009082|GO:0016491
Pumo152g00003 822 ProSiteProfiles Myosin motor domain profile. 96 173 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo152g00003 822 Pfam Cell cycle regulated microtubule associated protein 709 805 IPR027330 -
Pumo152g00003 822 Gene3D - 486 694 IPR013328 GO:0016491
Pumo152g00003 822 FunFam Ketol-acid reductoisomerase chloroplastic 369 485 - -
Pumo152g00003 822 ProSiteProfiles Myosin motor domain profile. 1 95 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo152g00003 822 ProSiteProfiles IQ motif profile. 295 324 IPR000048 GO:0005515
Pumo152g00003 822 Gene3D - 321 485 - -
Pumo152g00003 822 Pfam IQ calmodulin-binding motif 178 196 IPR000048 GO:0005515
Pumo152g00003 822 Pfam IQ calmodulin-binding motif 203 219 IPR000048 GO:0005515
Pumo152g00003 822 Pfam IQ calmodulin-binding motif 273 292 IPR000048 GO:0005515
Pumo152g00003 822 Pfam IQ calmodulin-binding motif 297 316 IPR000048 GO:0005515
Pumo152g00003 822 Pfam IQ calmodulin-binding motif 227 245 IPR000048 GO:0005515
Pumo152g00003 822 ProSiteProfiles IQ motif profile. 224 253 IPR000048 GO:0005515
Pumo152g00003 822 SMART iq_5 271 293 IPR000048 GO:0005515
Pumo152g00003 822 SMART iq_5 294 316 IPR000048 GO:0005515
Pumo152g00003 822 SMART iq_5 198 220 IPR000048 GO:0005515
Pumo152g00003 822 SMART iq_5 175 197 IPR000048 GO:0005515
Pumo152g00003 822 SMART iq_5 223 245 IPR000048 GO:0005515
Pumo152g00003 822 Gene3D - 108 171 - -
Pumo152g00003 822 Gene3D - 3 102 - -
Pumo152g00003 822 SMART MYSc_2a 1 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo152g00003 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 226 IPR027417 -
Pumo152g00003 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 227 320 IPR027417 -
Pumo152g00003 822 FunFam unconventional myosin-Va 274 321 - -
Pumo152g00003 822 Pfam Acetohydroxy acid isomeroreductase, NADPH-binding domain 321 484 IPR013116 -
Pumo152g00003 822 Gene3D - 226 274 - -
Pumo152g00003 822 Gene3D - 176 225 - -
Pumo152g00003 822 Gene3D - 275 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo152g00003 1 351 Myosins gene family AT5G43900 59.701 3.00e-145 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo152g00003 K00053 - gmx:100789879 701.819