Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo151g00005 ATGGGGAAGCCCGCAGGGAAGAAGAAGGGTAGTGCTGCAAATTCACACGCCAAGCCCGGAAAGTTTTCCAAAGCTTTCGATGAAGACACGGCCATGTTCATCACCATGTCACAAGAGTTCAGGGAAGAAGGTAACAGGTTGTTTCAGAAGAAGGACCACGAAGGCGCCATGCTCAAGTACGAGAAGGCACTCAAGCTGCTCCCCAAGAACCACATAGATGTCGCGCACCTTCGTACCAACATGGCCACGTGTTACATGCAATTGGGTCTCGGGGAGTACCCTCGAGCCATTCACCAATGTAATTTGGCCTTGGAAGTGTCTCCCAGATACAGCAAAGCTCTTCTGAGAAGAGCCACCTGCTATCGTGCGCTTAATCGCTTCGATTTGGCGCTCAGGGATGTTCAACTTGTTTTGGGCATGGAACCTAATAACCTCACCGCGTTGGAGCTTCTCGAGAGTCTCGGAAAGTCAACGGAAGAAAAAGGGGTCTTTGTTGATGATAAAGGTGTCGCTTTTGATGCTACCGTTCATCACTCTCCCGCTCCTACTTCGCAAAAACTGAAGAAAAAGAGAGGTAAAAAAATTGAGGACAACAAGGTGGCTGTGGAGGAAAAAGTGAGTGCTGTTGAGGACAAGGTGGTTGTGGAGGAAAAAGTGACTAGTTTTGAGGACGAGGTGGTTGTGGAGGAAAACGTGAGTGGTGTGGAGGATAAACAAGTTGTTTCAAAAACGATTGAGCAAGAGAAAAGGGTGGTGGAGCCTGTGGAGGAAGAAAAATCTGTCACAGTCACAAGGAGTGTGAAGTTGGTGCTTGGAGAGGATATAAGGTGGGCAGAGCTACCCGTGAATTGTAGTGTGAAGTTGGTGAGGGATATAGCTAGGGATAGGTTTCCAGGTTTGAAGGGTGTTCTTGTCAAGTATAAGGATAAAGAGGGTGATTTGGTTACAATCACTACTACTGATGAACTAAGGTTAGCTGAAAAATCTGCTCCTGAGAAGGCAACGTTTAGGCTTTATATTACTGAGGTCAGTCCAGATCAAGAACCTTCTTATGATGGAAATGGAACAACCAATGGGGATGAAGTGCGAAGGGGTGGTGGAGAACCGAGTGATGGTGCTGAGAATGGGGCTATGGAAGAAGGAAAAAATAAAGATGTGGCAAAAAGGATGATTACTGTGGAGGACTGGCTTCTCCAGTTTGCAAGGCTGTTCAAGAACCATGTAGGGTTTGAGTCTGATTCATATCTAGATACTCATGAGTATGCAATGAAGCTGTATGAAGAAGCAATGGAGGATACGGTGGCAAGCAATGATGCTCAAGAACTTTTTGGAATTGCTGCGGATAAATTTCAAGAGATGGCAGCTTTGGCATTGTTTAATTGGGGAGTGTCCAAATGTCCAGGGCAAGGAACCAGGGTTTCTTTTCAGAGGATGGGGCAAGAGAATCTTCCTTGGAGCATATAA 1464 0.4631 MGKPAGKKKGSAANSHAKPGKFSKAFDEDTAMFITMSQEFREEGNRLFQKKDHEGAMLKYEKALKLLPKNHIDVAHLRTNMATCYMQLGLGEYPRAIHQCNLALEVSPRYSKALLRRATCYRALNRFDLALRDVQLVLGMEPNNLTALELLESLGKSTEEKGVFVDDKGVAFDATVHHSPAPTSQKLKKKRGKKIEDNKVAVEEKVSAVEDKVVVEEKVTSFEDEVVVEENVSGVEDKQVVSKTIEQEKRVVEPVEEEKSVTVTRSVKLVLGEDIRWAELPVNCSVKLVRDIARDRFPGLKGVLVKYKDKEGDLVTITTTDELRLAEKSAPEKATFRLYITEVSPDQEPSYDGNGTTNGDEVRRGGGEPSDGAENGAMEEGKNKDVAKRMITVEDWLLQFARLFKNHVGFESDSYLDTHEYAMKLYEEAMEDTVASNDAQELFGIAADKFQEMAALALFNWGVSKCPGQGTRVSFQRMGQENLPWSI 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo151g00005 487 ProSiteProfiles TPR repeat profile. 37 70 IPR019734 GO:0005515
Pumo151g00005 487 ProSiteProfiles TPR repeat profile. 111 144 IPR019734 GO:0005515
Pumo151g00005 487 MobiDBLite consensus disorder prediction 1 22 - -
Pumo151g00005 487 SMART tpr_5 37 70 IPR019734 GO:0005515
Pumo151g00005 487 SMART tpr_5 75 110 IPR019734 GO:0005515
Pumo151g00005 487 SMART tpr_5 111 144 IPR019734 GO:0005515
Pumo151g00005 487 SUPERFAMILY CAD & PB1 domains 262 351 - -
Pumo151g00005 487 SMART PB1_new 264 343 IPR000270 GO:0005515
Pumo151g00005 487 Gene3D Tetratricopeptide repeat domain 34 162 IPR011990 GO:0005515
Pumo151g00005 487 SUPERFAMILY TPR-like 34 151 IPR011990 GO:0005515
Pumo151g00005 487 Pfam PB1 domain 264 341 IPR000270 GO:0005515
Pumo151g00005 487 PANTHER PROTEIN CLMP1 2 465 IPR044517 -
Pumo151g00005 487 MobiDBLite consensus disorder prediction 345 383 - -
Pumo151g00005 487 CDD PB1 272 341 - -
Pumo151g00005 487 Gene3D - 256 343 - -
Pumo151g00005 487 ProSiteProfiles PB1 domain profile. 264 343 IPR000270 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo151g00005 25 144 Calmodulin-binding Proteins AT3G25230 31.008 8.72e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo151g00005 K26538 - gmx:100805760 769.229