Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo149g00023 ATGGTTTGTTGTAAACTAGGGAAAATGCATGTTTTCCTATACATGTGGTTGTGGCAAAGTATTTCTTTTCATGTTAAAGCAGCAAATGACAGTTTGAAGCCAGGTGATGCACTGAATAACACAACCGAACTATGTTCTGAAAATAGAAAATATTGCATGAGTTTTGGCCCAATTGGGCATAGTGATTATGATCACTACTTGCGCATACGTGCCCAAGTAATAGACAATTGGGTAGTGTGGGTTGCAAATGCAAACCAGCCTGTTGACCTCTCAGCAGCTTTATTGCTAGATCACTCTGGTGTACTAAAAATAGAATCCAACCATAAGGAACCAATAATCCTTTACTCTCCACCTCAACCTGTTCACAACACTGTGGTGGCCACCTTGTTGGACACAGGCAATTTTGTGTTGCAACAACTTCACTCCAATGGGTCAAAAAGTGTGTTGTTATGGCAAAGCTTTGATCACCTTGGTGATACTTTGATCCCGGGGATGAAGTTAGGAGTTAATCACAAAAGTGGTCATAATTGGTCACTAGTTTCATGGTTTAGTCAATCCATCCCAGCTCCGGGTCCTTTCAGGCTTGAATGGGAACCCCAAAGAAAAAAATTGACCATCAAGAGACAAGGAAAAGTTTGTTGGACAAGTGGAGAACTTAGAGACAACAAAAGATTTGAGCATGTTTGGGAGGCCAAGTACAATGTTGTCTCAAATGAAGATGAAGATTCCTTTGGATTGGCATTCTCAAATGATGAGCACATAAAATGGACGCTATTGGAAACTGGGCAATTGATAAATAAGGAAGGAGGTGATATTGCAAGGGGTGATTTGTGTTATGGTTACAATACTGATGGAGGGTGCCAAAAATGGGAGGAGATACCCATCTGCAGGCACCATGGTGATGTATTTAAGATTGTGCAAGGTTTCCCCGATTCAAACCTGGGAAGCAATCTAGCAAATTTGAGTTATGGCATTAGTGATTGCTGGGCTATTTGCTGGAGCAACTGTAGCTGCACTGGATTCAAAGAATATAATGAAAATGGAACTGGTTGTATTTTCTTTCATTGGGATTCAATGGAAGGTACTAATATTGCAAGTGGTGGGGAAAACTTCTACATGTTGGTAAAAAACAACCACCACGAAGGTACAAAAAAATGGATATGGATAAGCATTGTAATGGCAATTGCTCTATTCTTAATTTGCCTCTTCATTTTATGTCTGGCCTTAAAGAAAAGAAAATATATATTTAAAGATAAGAAAAGAAAAGGAGTGGAGATTAAGATGTTAGATTTAGCAGCTTCAAATAGATCCTCTGGCATCAAAGATCTTGAAGATGATTTAAAGGGACATGGTTTAAAAGCATATGACTATACATTAATTGTGGAAGCCACAAATGGTTTTTCATCTGAAAAGAAGTTAGGACAGGGAGGCTTTGGACCAGTTTACAAGGGAATCCTACCAACAGGGCAAGAAGTTGCTGTAAAAAGACTTTCAAAAGCTTCTGGACAAGGAATTGTGGAATTCAAAAATGAAGTAACACTCATATGTGAACTTCAGCACATGAATCTTGTACAACTACTTGGTTGCTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATTGTACTAGAAGCAAGTTACTAGATTGGAAGAAGCGGTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCACAGGGACTTGAAAGCTAGTAACATACTTCTTGATGAGAACATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTGTAGCCAACAAGAATCCGTATCAAATACCAATAGGATTGTTGGCACATACGGTTACATGTCTCCAGAATATGCCATGGAAGGAATTTTCTCTACTAAGTCTGATGTCTATAGTTTTGGAGTGTTGCTACTTGAAATTGTAAGTGGAAGAAGAAACAATAGCTTTCATGATGCCAATGGTCCACTAAATCTAATAGGACATGCATGGGATTTATGGAACAAAGGTATGAGTGTACAATTAGTGGATCCATCACTAAATGAGTTGTTTGACCCTGATGAAGTACAAATATGCATACATGTTGGTCTCTTATGCGTAGAACAATATGCAAAAGATCGACCAACAATGTCAAACATTATATCAATGTTAACAAACAAAACTGCAACAATTACCTTACCTCAGAGACCTGCATTCTGTATTGGAAGAGAGACCTATGATGGGATAATATCTTCCAAAGAGTTATTTACATGA 2316 0.3787 MVCCKLGKMHVFLYMWLWQSISFHVKAANDSLKPGDALNNTTELCSENRKYCMSFGPIGHSDYDHYLRIRAQVIDNWVVWVANANQPVDLSAALLLDHSGVLKIESNHKEPIILYSPPQPVHNTVVATLLDTGNFVLQQLHSNGSKSVLLWQSFDHLGDTLIPGMKLGVNHKSGHNWSLVSWFSQSIPAPGPFRLEWEPQRKKLTIKRQGKVCWTSGELRDNKRFEHVWEAKYNVVSNEDEDSFGLAFSNDEHIKWTLLETGQLINKEGGDIARGDLCYGYNTDGGCQKWEEIPICRHHGDVFKIVQGFPDSNLGSNLANLSYGISDCWAICWSNCSCTGFKEYNENGTGCIFFHWDSMEGTNIASGGENFYMLVKNNHHEGTKKWIWISIVMAIALFLICLFILCLALKKRKYIFKDKKRKGVEIKMLDLAASNRSSGIKDLEDDLKGHGLKAYDYTLIVEATNGFSSEKKLGQGGFGPVYKGILPTGQEVAVKRLSKASGQGIVEFKNEVTLICELQHMNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTRSKLLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMCSQQESVSNTNRIVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIVSGRRNNSFHDANGPLNLIGHAWDLWNKGMSVQLVDPSLNELFDPDEVQICIHVGLLCVEQYAKDRPTMSNIISMLTNKTATITLPQRPAFCIGRETYDGIISSKELFT 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo149g00023 771 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 432 542 - -
Pumo149g00023 771 SMART serkin_6 467 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo149g00023 771 SUPERFAMILY Protein kinase-like (PK-like) 453 755 IPR011009 -
Pumo149g00023 771 ProSiteProfiles PAN/Apple domain profile. 296 376 IPR003609 -
Pumo149g00023 771 Gene3D Transferase(Phosphotransferase) domain 1 543 748 - -
Pumo149g00023 771 Gene3D Phosphorylase Kinase; domain 1 430 542 - -
Pumo149g00023 771 SMART blect_4 35 157 IPR001480 -
Pumo149g00023 771 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 139 754 - -
Pumo149g00023 771 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 184 IPR036426 -
Pumo149g00023 771 PIRSF SRK 278 768 IPR024171 GO:0004674
Pumo149g00023 771 PIRSF SRK 2 267 IPR024171 GO:0004674
Pumo149g00023 771 Gene3D - 23 155 IPR036426 -
Pumo149g00023 771 Pfam D-mannose binding lectin 78 182 IPR001480 -
Pumo149g00023 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Pumo149g00023 771 CDD STKc_IRAK 473 740 - -
Pumo149g00023 771 Pfam PAN-like domain 296 357 IPR003609 -
Pumo149g00023 771 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Pumo149g00023 771 Pfam Protein tyrosine and serine/threonine kinase 469 737 IPR001245 GO:0004672|GO:0006468
Pumo149g00023 771 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 543 746 - -
Pumo149g00023 771 ProSiteProfiles Protein kinase domain profile. 467 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo149g00023 445 753 Receptor kinase-like Gene Family AT3G45860 57.235 2.55e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo149g00023 PK_Tyr_Ser-Thr 6.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo149g00023 - - gmx:100820258 1040.02