Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo149g00004 ATGACCACCATGCTCAGCTACTCACCCCCGCGTTTCAGAATCGCCGTCGACACTCACCACGATCCTCTCTTACCCTTTCTCTGGTCTATCAAGAAAGCCCTAGAAGCTTCCAACGATTCCGTTTCGAATCTCAGTGACTTACTCAAAGATTGCATCAAAAACTTCAAGAACAATGACCGCTACCGAAACGACATCAGATTTCTCAAGATCTGGCTCCTCTATATGGGAGTTAGTGGTGATTTTGATAGTGTTTTCAAAGAAATGCTGGACAGTAATGTATGTGCCAATAATTCTTCACTTTATGTGTGGTCTGCGAGTTTTTTTGAGTTGAAGGGAAGATTGCACGATGCTCTCACCATATATCAGCTTGGCATTTGCAGGAATGCGGAGCCAATTGAGTGGTTGAAGAAGGCACAAACCTTATTTCTCAATAGAATTTCTGAAATACAAAATGCTGCTTCAACTCAGAAGGTTGATGATAAAGAATCCAAGAAACTGGAAGATAATGACATTAATCCTTGGGGCACCTCCACCATGGATAGCCTGTTAAAGAAGATACATCCTTTAATTATGAAATTTGATGGGTATCGTTCAAGCAGTAAACCATACACAGGAAAAGTGGCCTTATCTACGTTGAAGAATTCATCAAGGAATAAAGTTATAGAGATAGGTGGAATGAAGTACCATGTAAAGGGCTGTGCAGGACAGGGTGGTTTTGCCCAAGTATATAAGGCTAATGTCGACAGCGATCCTGACAATGTTGTTGCACTGAAGATACAAAAACCAGCTTTCCCTTGGGAATTTTACATTTATCGTCAGCTTGATCAGCGCATCTTAGATAGAGAGAGGTCAAGTTATGGTTTTGCTCACCGAATGCATCTCTATTCTGACTGTAGTATACTCATCTGTGACTATTTAGCTAATGGAACACTACAGGATGTGATAAACTCATATGTGGTCATAGGAAAATCCATGGAAGAAGTGTTATGCATTTATTACACAATAGAAATGTTACACATGGTTGAAACTATGCATGGTGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTAATTCGCTATGCCAGGGGTGATCTTACAGAAGATGGGTTCTTGGACCGAAGTAGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTGCATCTCTTTCCAGATCACACACTATTTAAGGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCTAGAGGATAAGCCGTGGAAATTTCAGGTAGATGCATATGGCCTTTGTGCTATTGTCCATATGATGTTGCATAATTCCTATATGGAAGTTGTCAAAAAAGAACAATCTGATGGGGGCTACGTGTATCTTCCCAAACTACCCTTTAAACGTTACTGGAACATTGAGCTCTGGAAGACTTTCTTCACTAAGATGCTAAACCAATACCCCCATGATGATGATAGGAGTTTGCTGCAGGAATTGAAGAAGTCCTTCCAAGATTATATGGGCTCCAATCCTCAGCTTATAAAGAAACTAAAAGAGTTACTCTCAAAGCAAAGGGCTTCCTTGTGTTCTGCTTAA 1596 0.4104 MTTMLSYSPPRFRIAVDTHHDPLLPFLWSIKKALEASNDSVSNLSDLLKDCIKNFKNNDRYRNDIRFLKIWLLYMGVSGDFDSVFKEMLDSNVCANNSSLYVWSASFFELKGRLHDALTIYQLGICRNAEPIEWLKKAQTLFLNRISEIQNAASTQKVDDKESKKLEDNDINPWGTSTMDSLLKKIHPLIMKFDGYRSSSKPYTGKVALSTLKNSSRNKVIEIGGMKYHVKGCAGQGGFAQVYKANVDSDPDNVVALKIQKPAFPWEFYIYRQLDQRILDRERSSYGFAHRMHLYSDCSILICDYLANGTLQDVINSYVVIGKSMEEVLCIYYTIEMLHMVETMHGVGLIHGDFKPDNLLIRYARGDLTEDGFLDRSSPWCDQGLCLVDWGRGIDLHLFPDHTLFKGDCRTSGFRCIEMLEDKPWKFQVDAYGLCAIVHMMLHNSYMEVVKKEQSDGGYVYLPKLPFKRYWNIELWKTFFTKMLNQYPHDDDRSLLQELKKSFQDYMGSNPQLIKKLKELLSKQRASLCSA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo149g00004 531 SMART serkin_6 228 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo149g00004 531 SMART mad3_bub1_i 13 125 IPR013212 -
Pumo149g00004 531 FunFam Mitotic checkpoint serine/threonine-protein kinase BUB1 226 528 - -
Pumo149g00004 531 Pfam Protein kinase domain 228 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo149g00004 531 SUPERFAMILY Protein kinase-like (PK-like) 227 509 IPR011009 -
Pumo149g00004 531 ProSiteProfiles BUB1 N-terminal domain profile. 1 163 IPR013212 -
Pumo149g00004 531 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 157 525 IPR015661 GO:0007094
Pumo149g00004 531 Gene3D Transferase(Phosphotransferase) domain 1 226 528 - -
Pumo149g00004 531 Pfam Mad3/BUB1 homology region 1 14 125 IPR013212 -
Pumo149g00004 531 Gene3D - 11 164 - -
Pumo149g00004 531 ProSiteProfiles Protein kinase domain profile. 228 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo149g00004 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo149g00004 222 361 MAP Kinase Kinase Kinase Kinase AT3G15220 28.082 1.51e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Pumo149g00004 Pkinase 1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo149g00004 K02178 - gmx:100783171 1027.7