LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo149g00002	ATGGCTTCAGCTTCAGCATCTTATTCCTTTACCATTAGTGTGCTATTCCTCATTTTTGTGCAATTGTCATGTTTCATAAACAACCTTAATGCAAAGAATACCAATGCCAACAGCCACAACCATCACAAGCACCAACACACTCAAAACCCACCCTTAAACCCAAGGCTTCACATGGCTTTTCTTGGCCTACAAGCTTGGAAGCAAGTGATCTACTCAGACCCAAATAACTTCACTGCCAATTGGGTAGGTCCTTCAGTTTGCAACTACAAAGGTGTGTACTGTGCTCCCTCACTTGATGACCCTAAAGTGACAGTTGTGGCTGGCATTGACCTTAACTTTGCAGACATAGCAGGGTTCCTACCCAATGAAATAGGCCTTCTCTCTGACCTTGCAGTCCTTCATCTCAGCAACAACCGCTTTTGTGGCATCCTCCCAATGTCCTTCACCAACCTCACTCTACTCTATGAGCTTGACCTTAGCAGCAACAGGTTTGTTGGACCTTTTCCTTTGGTTGTGCTTTCCCTTCCTATGCTCAACTACCTTGACCTACGCTACAATGAATTTGAAGGGCCATTGCCTCCTCTACTCTTCAACAAAACCTTTGATGCCATTTTTCTCAACAACAACCGCTTCAGCAGTTCTATTCCTCCAAACTTAGGCAAAAACTCAGCTACTGTGCTAGTCTTTGCCAACAACAAATTTGGAGGGTGTCTCCCAGAAAGCATAGTAAACTTTGCTGACACTTTGGAGGAACTTGTGCTAATCAACACCAGCTTGTCAGGTTGTTTGCCACAACAAGTAGGGTTTCTCTACAAACTGAAAGTGTTGGATGTGAGTTTCAACAGCATTGTTGGCCCCATACCCTACAGCCTTGCAGGGTTGTCTCACTTGGAGCAACTAAACTTGGGGCATAACATGATGAGTGGCACAGTCCCTATGGGGGTTTGTGAGTTGCCAAACTTGGCAAACTTCACTTTCTCTTACAACTTCTTCTGTGAGGAAGAGGGTATCTGTCAGAATTTGACATCAAAGAGAATAGTGTTTGATGATAGGAGGAACTGTTTGCCAGAGAAGCCACTGCAGAGGAGTGAAAAGGAATGCAAGGCCAAACTTGAACACCCAGTTGATTGCTCTGAGCTTTGCTGTGTTGTGGGAAGCAATGTCTCTTCTGGTTCAGTGGCAGTTCCACCAGCTGCTGCAATTCCTGCAGCAATGCCTGTGTCTGCACCTCTTCTTGCACCAAGCCACCCTTAA	1254	0.4537	MASASASYSFTISVLFLIFVQLSCFINNLNAKNTNANSHNHHKHQHTQNPPLNPRLHMAFLGLQAWKQVIYSDPNNFTANWVGPSVCNYKGVYCAPSLDDPKVTVVAGIDLNFADIAGFLPNEIGLLSDLAVLHLSNNRFCGILPMSFTNLTLLYELDLSSNRFVGPFPLVVLSLPMLNYLDLRYNEFEGPLPPLLFNKTFDAIFLNNNRFSSSIPPNLGKNSATVLVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLKVLDVSFNSIVGPIPYSLAGLSHLEQLNLGHNMMSGTVPMGVCELPNLANFTFSYNFFCEEEGICQNLTSKRIVFDDRRNCLPEKPLQRSEKECKAKLEHPVDCSELCCVVGSNVSSGSVAVPPAAAIPAAMPVSAPLLAPSHP	417

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo149g00002	417	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	19	387	-	-
	Pumo149g00002	417	Gene3D	Ribonuclease Inhibitor	222	347	IPR032675	-
	Pumo149g00002	417	SUPERFAMILY	L domain-like	66	346	-	-
	Pumo149g00002	417	FunFam	Leucine-rich repeat extensin-like protein 1	60	221	-	-
	Pumo149g00002	417	Gene3D	Ribonuclease Inhibitor	61	221	IPR032675	-
	Pumo149g00002	417	Pfam	Leucine rich repeat	248	306	IPR001611	GO:0005515
	Pumo149g00002	417	Pfam	Leucine rich repeat	130	187	IPR001611	GO:0005515

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo149g00002	53	382	Leucine-rich Repeat extension Gene Families	AT3G24480	54.683	2.83e-132	387

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo149g00002	-		-	gmx:100782629	753.821