Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00267 ATGGCTACTAACTATGGTACAGGTCGCCGTAAGACCGCAACTGCACGTGTTTTCTTATCAGCTGGTACAGGTAAACTCGTAATTAACAACAATACGATTGAGCAATATTTCGGTCGTGAAACTGCTCGTATGGTTGTTCGTCAACCTTTAGAACTTCTAGAAGTGACTGAAAAATACGACCTTTACATCACTGTTGCTGGTGGTGGTATTAGTGGTCAAGCAGGCGCTATCCGTCACGGTATTACTCGTGCATTGATCGCTTCTGATGAAACTTTAAAACCTGCTCTTCGTCAAGCTGGTTTCGTTACTCGTGATGCTCGTGAAGTTGAACGTAAGAAACTTGGTTTACGTAAAGCTCGTAAACGTCCTCAGTTCTCTAAACGTTAA 387 0.4289 MATNYGTGRRKTATARVFLSAGTGKLVINNNTIEQYFGRETARMVVRQPLELLEVTEKYDLYITVAGGGISGQAGAIRHGITRALIASDETLKPALRQAGFVTRDAREVERKKLGLRKARKRPQFSKR 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00267 128 FunFam 30S ribosomal protein S9 1 128 - -
Pumo147g00267 128 Pfam Ribosomal protein S9/S16 8 128 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pumo147g00267 128 SUPERFAMILY Ribosomal protein S5 domain 2-like 4 128 IPR020568 -
Pumo147g00267 128 PANTHER RIBOSOMAL PROTEIN S9 5 128 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pumo147g00267 128 Gene3D - 1 128 IPR014721 -
Pumo147g00267 128 ProSitePatterns Ribosomal protein S9 signature. 67 85 IPR020574 GO:0003735|GO:0005840|GO:0006412
Pumo147g00267 128 Hamap 30S ribosomal protein S9 [rpsI]. 1 128 IPR023035 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00267 1 128 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 34.014 1.11e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00267 K02996 - acb:A1S_3001 225.713