Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00263 ATGCCTGAATTACCTGAAGTTGAAACCACTAAAAATAGTTTATTGCCTTTAATTGATCAAAAAGTGATATCTGTTCAAGTCCGTGAATCACGTTTACGTTGGTCTATCCCTCAAGATATTCAAAAACTGCAAGGACAAAAACTTCTTAAACTGACACGGCGCTCTAAATATATTTTAGCTGAGTTTGAACAAGATACCTTGTTATGGCATTTGGGTATGTCGGGTAGTTTCCGTCTTTGTGATACACAAACTGAACTGCGCAAACACGACCATTTTATTATTCAATTTGAAGATACAGAATTGCGTTACCACGATCCGCGTCGTTTTGGCTGTATTTTATGGCTCGATTCAAATTCACAAAGTAAACTGCTTGATACTTTAGGACCTGAACCTTTAAGTGACGCATTTCATGCCGAATATTTGGCGAACAAACTCAAAAAGAAAAATGTCGCGATTAAAGTGGCAATTATGGATAACCATGTTGTGGTGGGTGTTGGAAATATTTATGCCACGGAAAGCTTATTCAATTTAGGCATTCATCCTGCACAACCTGCTTCCAGCCTAACAGTGCTGCAACTTGAAAAATTAGTGGTCGAAATTAAACGAATATTAAAACAAGCCATTGATTTAGGCGGTTCAACCCTACGTGACTATAGTAATGCGATGGGTGAAAATGGCTATTTCCAACAAACGCTATTGGCTTATGGGCGTGCAGTCAAAGATAAAGAGCTTGCTGAACAACTTAAGAAAAAAATTAAAGCAGGAGCTGATTTCGCACAAATTGCAAAACAGCATTCAACCTGCCCGTCAAATAAAAAAGGCGGGGAACTCGGCGACATCAAAAAAGGGCAATTGGTTGCGCCTATTGATAAAGCAGTATTTACACTAAAAGAACGTGAATTGCATGGTCCAATTAAAAGTCAATTTGGTTGGCATCTATTAGAAATTAAATTTCGGATGGATTAA 966 0.3799 MPELPEVETTKNSLLPLIDQKVISVQVRESRLRWSIPQDIQKLQGQKLLKLTRRSKYILAEFEQDTLLWHLGMSGSFRLCDTQTELRKHDHFIIQFEDTELRYHDPRRFGCILWLDSNSQSKLLDTLGPEPLSDAFHAEYLANKLKKKNVAIKVAIMDNHVVVGVGNIYATESLFNLGIHPAQPASSLTVLQLEKLVVEIKRILKQAIDLGGSTLRDYSNAMGENGYFQQTLLAYGRAVKDKELAEQLKKKIKAGADFAQIAKQHSTCPSNKKGGELGDIKKGQLVAPIDKAVFTLKERELHGPIKSQFGWHLLEIKFRMD 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00263 321 Pfam Formamidopyrimidine-DNA glycosylase N-terminal domain 1 111 IPR012319 GO:0003906|GO:0006284|GO:0008270|GO:0019104
Pumo147g00263 321 SUPERFAMILY FKBP-like 236 315 - -
Pumo147g00263 321 Pfam PPIC-type PPIASE domain 242 316 IPR000297 GO:0003755
Pumo147g00263 321 NCBIfam DNA-formamidopyrimidine glycosylase 1 242 IPR020629 GO:0003906|GO:0006281|GO:0008270|GO:0008534
Pumo147g00263 321 Gene3D - 2 126 IPR035937 -
Pumo147g00263 321 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 223 318 IPR000297 GO:0003755
Pumo147g00263 321 SMART H2TH_2 127 219 IPR015886 GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799
Pumo147g00263 321 ProSiteProfiles Formamidopyrimidine-DNA glycosylase catalytic domain profile. 2 110 IPR012319 GO:0003906|GO:0006284|GO:0008270|GO:0019104
Pumo147g00263 321 SUPERFAMILY N-terminal domain of MutM-like DNA repair proteins 2 136 IPR035937 -
Pumo147g00263 321 PANTHER FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1 240 - -
Pumo147g00263 321 Pfam Formamidopyrimidine-DNA glycosylase H2TH domain 127 217 IPR015886 GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799
Pumo147g00263 321 SUPERFAMILY S13-like H2TH domain 128 220 IPR010979 GO:0003676
Pumo147g00263 321 SMART Fapy_DNA_glyco_2 2 113 IPR012319 GO:0003906|GO:0006284|GO:0008270|GO:0019104
Pumo147g00263 321 CDD EcFpg-like_N 2 116 - -
Pumo147g00263 321 Gene3D - 237 319 IPR046357 GO:0003755
Pumo147g00263 321 Gene3D - 128 224 - -
Pumo147g00263 321 FunFam Formamidopyrimidine-DNA glycosylase 129 256 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00263 241 316 Sulfurtransferasese or Rhodanese AT5G19370 38.158 1.62e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00263 K10563 - acb:A1S_2831 388.652