Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00218 ATGGCTAAAGATACTCGCGCACGCAAGAAGGTCACTCGTACCGTCTCTGAAGGTGTTGCACACATTCACGCTTCTTTTAATAACACCATTGTGACTATTACCGATCGTCAAGGTAATGCACTGGCTTGGGCTACCTCTGGTGGACAAGGCTTCCGTGGATCACGTAAATCAACTCCGTTTGCTGCTCAGGTAGCTGCTGAAGTCGCTGGTAAAGCTGCTTTAGATTACGGTTTGAAAAACTTGGACGTCCTTGTAAAAGGTCCTGGTCCTGGTCGTGAATCTGCGGTTCGTGCTTTAGGTGCAGTGGGTTATAAAATTAACAGCATTACCGATGTGACGCCAATCCCGCACAACGGTTGCCGTCCACCTAAAAAACGTCGCGTGTAA 387 0.4832 MAKDTRARKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPFAAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCRPPKKRRV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00218 128 Hamap 30S ribosomal protein S11 [rpsK]. 3 128 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo147g00218 128 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 14 126 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo147g00218 128 FunFam 30S ribosomal protein S11 1 128 - -
Pumo147g00218 128 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 128 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo147g00218 128 Pfam Ribosomal protein S11 18 127 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo147g00218 128 ProSitePatterns Ribosomal protein S11 signature. 96 118 IPR018102 -
Pumo147g00218 128 Gene3D Ribosomal protein S11 1 128 IPR036967 GO:0003735|GO:0005840|GO:0006412
Pumo147g00218 128 SUPERFAMILY Translational machinery components 15 128 - -
Pumo147g00218 128 NCBIfam 30S ribosomal protein S11 9 125 IPR019981 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00218 18 118 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 39.091 5.61e-19 75.9