Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00216 ATGATGAAAGGGCAGCCGTTTCATGTGAAATATCGTGAAATTATTCGCCGAATGATGTTTCTTATAGGGGCATTAATAGTCTTTCGACTAGGGGCACATATTCCAGTACCAGGCATTAATAATGCTGCACTTGAAAATCTTTTTAATGCAAACCAAGGTACAATCCTTGGTTTGTTTAACATGTTTTCAGGTGGTGCATTAGAGCGGATGTCAATTCTTGCTTTAGGGATCATGCCTTATATTTCTGCTTCAATTATTGTGCAGTTAATGTCTACGGTTGTTCCTTCGCTAGAAGCTTTAAAAAAAGAAGGCGAGCAAGGTAAGCGTAAGATTAATCAATATACGCGACAAGGAACATTGTTTCTTGCAGTGGTGCAGTCAGTCGGAATGTGTGCAGGACTCATTAGTCAAGGAATTACTTTGACTTCAGGTCTGGCTTTTTATATTCCTGCGGTAACTTCACTTGTTGCGGGTACGATGTTTTTGATGTGGTTGGGTGAGCAAATTACTGAACGTGGAGTAGGGAATGGTATATCCATGATCATCTTCGCGGGTATTGTTGCTGGATTGCCAAATTTGATTATGCAGTCTTTGTCATCCGTAGATAATGGTCAAACAAGCCTAATAGGTTTAGTTGTGTTTGGTCTACTGTCTATAGGTGTATTAGCAGCGATTGTGTTTATTGAAAAAGCGCAGCGTCGCATACCAGTTAACTATGCTCAAAAACAACAAGGTCGTCGTGTATTTACTGCACAGCAAACACATTTGCCATTAAAAATTAATATGGCGGGTGTGATTCCAGCAATTTTTGCTAGTTCATTACTTTTGTTCCCTGCGAGCTTAGGTCAATGGATTGGTAGTGCTGATCCTAGTGCAGGGATAATCAAGCGTGGTTTACAAGATTTGGCACTCGTGTTGTCGCCTGGACAGCCGTTGTATTTGGTGCTCTTTGGTGCGTTAATTATCTTTTTCTGTTACTTCTATACTGCGCTAGTATTTAGCCCGAAAGAAGTGTCAGAGAACTTGAAACGCAGCGGAGCTTATGTGCCTGGTATTCGTCCAGGTGAGCAAACTGCTCGTTACTTAGATCATATTCTCAATCGTTTGACCTTTATTGGCGCGATTTATATCACAGTGATTTGTTTAATGCCGATGGTATTACAGAGCTCATTTGGTATTCCATTCTCTCTGGGTGGTACCTCTTTGCTAATCGTTGTGGTAGTCGTGATGGACTTTATGGCTCAGCTACAAGCACATCTCACCTCGCATCAATACGATAATCAAACGTTAATGAGAAAAACGACTGCTCATCCTAAGGGATAA 1323 0.4104 MMKGQPFHVKYREIIRRMMFLIGALIVFRLGAHIPVPGINNAALENLFNANQGTILGLFNMFSGGALERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRQGTLFLAVVQSVGMCAGLISQGITLTSGLAFYIPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLPNLIMQSLSSVDNGQTSLIGLVVFGLLSIGVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWIGSADPSAGIIKRGLQDLALVLSPGQPLYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMVLQSSFGIPFSLGGTSLLIVVVVVMDFMAQLQAHLTSHQYDNQTLMRKTTAHPKG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00216 440 ProSitePatterns Protein secY signature 1. 71 90 IPR030659 -
Pumo147g00216 440 Coils Coil 97 117 - -
Pumo147g00216 440 Gene3D SecY subunit domain 6 425 IPR023201 -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 18 36 - -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 111 134 - -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 263 282 - -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 70 90 - -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 171 194 - -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 398 416 - -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 145 170 - -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 311 333 - -
Pumo147g00216 440 PRINTS Preprotein translocase SecY subunit signature 366 384 - -
Pumo147g00216 440 PIRSF SecY_Sec61alpha 6 435 IPR002208 GO:0015031|GO:0016020
Pumo147g00216 440 Hamap Protein translocase subunit SecY [secY]. 5 429 IPR026593 -
Pumo147g00216 440 Pfam SecY 71 413 IPR002208 GO:0015031|GO:0016020
Pumo147g00216 440 NCBIfam preprotein translocase subunit SecY 16 425 IPR002208 GO:0015031|GO:0016020
Pumo147g00216 440 FunFam Preprotein translocase subunit SecY 4 425 - -
Pumo147g00216 440 SUPERFAMILY Preprotein translocase SecY subunit 7 420 IPR023201 -
Pumo147g00216 440 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 10 419 IPR002208 GO:0015031|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00216 17 427 Chloroplast and Mitochondria Gene Families AT2G18710 35.492 5.32e-76 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00216 K03076 - acb:A1S_3061 813.913