Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00210 ATGGCCAGACTTAAAACACGTTACAACGAAGAACTTAAAGCTCAATTATTAGAACAATTGGGCGTTAAGAATGTGATGGAGATCCCTCGCATCACTAAAATCACCATTAATATGGGTGTTGGTGCTGCATCAGCTGACAAGAAATTGTTAGATGGCGCTCTTTCTGATATGCAAGCAATTGCTGGTCAAAAACCAGTTCTTACATTAGCACGTAAATCAATTGCGGGTTTTAAAATCCGTGATGGTTGGCCGATTGGTTGTAAAGTTACTTTACGCGGCGAACGTATGTACGAATTCTTAGATCGTTTGATCTCTATTGCGATCCCTCGTATTCGTGACTTTCGCGGTTTTTCTGCGAAATCATTTGATGGTCGTGGTAACTATTCGATGGGTTTGAAGGAACAGATCATGTTCCCTGAAATTGATTTCGATAAGATCGATCGTATCCGCGGTATGGATATTACGATCACTACGACTGCTCGCACCGATGACGAAGGTCGTGCGCTTATGCGTGCATTCGGCTTCCCGTTTAAATAA 537 0.4227 MARLKTRYNEELKAQLLEQLGVKNVMEIPRITKITINMGVGAASADKKLLDGALSDMQAIAGQKPVLTLARKSIAGFKIRDGWPIGCKVTLRGERMYEFLDRLISIAIPRIRDFRGFSAKSFDGRGNYSMGLKEQIMFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRAFGFPFK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00210 178 SUPERFAMILY RL5-like 3 178 IPR022803 -
Pumo147g00210 178 ProSitePatterns Ribosomal protein L5 signature. 57 73 IPR020929 GO:0003735|GO:0005840|GO:0006412
Pumo147g00210 178 Pfam ribosomal L5P family C-terminus 84 177 IPR031309 -
Pumo147g00210 178 Pfam Ribosomal protein L5 24 80 IPR031310 -
Pumo147g00210 178 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 178 IPR002132 GO:0003735|GO:0005840|GO:0006412
Pumo147g00210 178 Hamap 50S ribosomal protein L5 [rplE]. 1 178 IPR020930 GO:0003735|GO:0005840|GO:0006412
Pumo147g00210 178 Gene3D - 1 178 IPR022803 -
Pumo147g00210 178 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 10 178 IPR002132 GO:0003735|GO:0005840|GO:0006412
Pumo147g00210 178 FunFam 50S ribosomal protein L5 1 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00210 22 157 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 27.941 4.15e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00210 K02931 - acb:A1S_3069 316.235