Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00174 ATGGCAAATTTAAAAGAAATTCGCGCCAAAGTAGCTAGTATCAAGAGCACGCAAAAGATTACTCGCGCGATGCAAATGGTAGCAGCTTCTAAGATGCGTCGTGCGCAAGAGCGCATGGCTCAAGGCCGTCCGTATGCCGAAAATATGCACCGTGTAATTGCTCATCTAGTACAAGCGAATCCTGAATATAAACACCGTTATATGGTTGAACGCCCTGTAAAACGCGTTGGCTATATCATTGTTTCTTCAGATCGTGGTTTGGCAGGCGGCTTGAACATTAACTTGTTCAAGAAAGTTGTTAAGCACGTACAACAGCAACAAGAGCAGTCAATTGAAGTTCAATTTGCTTTAATTGGTCAAAAAGCGGTTTCGTTTTTTAAAAACTACGGCGGTAAAGTACTGGGTGCAACGACTAACGTTGGTGATGCACCAAGTCTTGAACAGTTATCTGGTTCTGTGCAAGTGATGTTAGATGCTTATGATAAAGGCGAGTTAGATCGTATTTATCTTGTATCGAACGGCTTTGTAAATGCCATGACTCAAAATCAAAAAGTAGAACAACTTGTTCCTTTGGCTGCGGCTGAAGATGACAAGAGTCTGAACCGTCAATATGGTTGGGATTATCTCTATGAGCCAGAAGCTGAAAAGCTTTTAAATGGCTTGTTGGTTCGCTATATCGAGTCTGTGGTGTATCAAGGTGTGATTGAAAACATCGCATGTGAGCAGTCTGCACGTATGGTCGCTATGAAAGCAGCGACAGATAATGCAGGCGATATCATCAAGAGCCTACAACTTATTTATAACAAGCTGCGTCAAGCCGCGATTACTCAGGAAATTTCTGAGATCGTTGGTGGTGCCGCTGCCGTTTAA 870 0.4287 MANLKEIRAKVASIKSTQKITRAMQMVAASKMRRAQERMAQGRPYAENMHRVIAHLVQANPEYKHRYMVERPVKRVGYIIVSSDRGLAGGLNINLFKKVVKHVQQQQEQSIEVQFALIGQKAVSFFKNYGGKVLGATTNVGDAPSLEQLSGSVQVMLDAYDKGELDRIYLVSNGFVNAMTQNQKVEQLVPLAAAEDDKSLNRQYGWDYLYEPEAEKLLNGLLVRYIESVVYQGVIENIACEQSARMVAMKAATDNAGDIIKSLQLIYNKLRQAAITQEISEIVGGAAAV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00174 289 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 2 289 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 Gene3D - 27 248 - -
Pumo147g00174 289 PRINTS ATP synthase gamma subunit signature 267 288 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 PRINTS ATP synthase gamma subunit signature 166 183 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 PRINTS ATP synthase gamma subunit signature 73 92 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 PRINTS ATP synthase gamma subunit signature 236 255 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 NCBIfam ATP synthase F1 subunit gamma 1 289 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 FunFam ATP synthase gamma chain 194 289 - -
Pumo147g00174 289 Pfam ATP synthase 3 288 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 Hamap ATP synthase gamma chain [atpG]. 1 289 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 Gene3D ATP synthase, gamma subunit, helix hairpin domain 5 286 - -
Pumo147g00174 289 PANTHER ATP SYNTHASE GAMMA CHAIN 1 288 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 CDD F1-ATPase_gamma 2 286 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo147g00174 289 ProSitePatterns ATP synthase gamma subunit signature. 275 288 IPR023632 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00174 2 289 Primary Pumps ATPases AT1G15700 29.721 6.94e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00174 K02115 - acb:A1S_0154 500.745