Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00172 ATGCCAGCAGTGTCGCAACAAACAGTAACTTCCCCGATATTAATTGCCTTAGATAAAATTAACGTTCGAATTGATGAGCGTGAAATTTTAAAGCATGTCGATTTTGCGTTACATGAACGCGAAATTGTCACGCTCATTGGTCCAAATGGTGCGGGAAAATCAACTTTAATTAAAGTGCTTTTGGGCATTGTGAAAGCCACGTCTGGTCAGGTTCATAGTCATAAAAAATTAAAATTTTCTTATGTGCCACAAAAGTTTAATCCTTCGCATAGTCTTCCTTTGCGAGTACAGGATTTATTGGCATTAGAAAAATGTAATGCTGCTAAAAAAGCAGAAATTATTGCAGATACAGGCATTACCCAATTACAGGATGCCAAAGTACAGCAACTTTCAGGTGGCGAACGGCAACGAGTTTTATTGGCACGTGCTTTGTTACGTCAACCTGATATTTTAGTGCTGGATGAACCAATGCAAGGTTTAGATATTCAATCTGAAGCTGAACTGTATGAGTATGTCAGAAGTTTACCGCAAAAATATGGTTGTGCTGTATTGATGGTATCGCACGATCTACAATGGGTTATGCAAGGGACACACCGCGTGGTCTGCCTGAATAAACACATTTGTTGTAGTGGTTTACCCGAAAATATCCAACAGCATCCTGAATATCAAGCTATTTTTGGAACCAATCGCGTGTTCTATCAACATCATCATGACCATTGTGGGCATGGCGATAGTGCAACGCCTTGCCAGCACGATCCCCGTCCACATATTCACCCTGAACAGGAAGCTTAA 792 0.4066 MPAVSQQTVTSPILIALDKINVRIDEREILKHVDFALHEREIVTLIGPNGAGKSTLIKVLLGIVKATSGQVHSHKKLKFSYVPQKFNPSHSLPLRVQDLLALEKCNAAKKAEIIADTGITQLQDAKVQQLSGGERQRVLLARALLRQPDILVLDEPMQGLDIQSEAELYEYVRSLPQKYGCAVLMVSHDLQWVMQGTHRVVCLNKHICCSGLPENIQQHPEYQAIFGTNRVFYQHHHDHCGHGDSATPCQHDPRPHIHPEQEA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00172 263 SMART AAA_5 39 206 IPR003593 GO:0016887
Pumo147g00172 263 Gene3D - 4 239 IPR027417 -
Pumo147g00172 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 225 IPR027417 -
Pumo147g00172 263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 229 IPR003439 GO:0005524
Pumo147g00172 263 Pfam ABC transporter 30 157 IPR003439 GO:0005524
Pumo147g00172 263 ProSitePatterns ABC transporters family signature. 130 144 IPR017871 GO:0005524|GO:0016887
Pumo147g00172 263 PANTHER METAL TRANSPORT SYSTEM ATP-BINDING PROTEIN TM_0124-RELATED 14 236 - -
Pumo147g00172 263 MobiDBLite consensus disorder prediction 243 263 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00172 30 191 Calmodulin-binding Proteins AT2G36910 29.353 4.51e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00172 K09817 - acb:A1S_0144 424.476