LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo147g00167	ATGGGCTACGGTGGTTCACATCAAGATGCAGCACAAGCAATTGGGAAAACCAACGATGGTGGTATCGATGGTATTATTAGTGAAGACCGTTTGGGGTTAGATAAAATTTATATTCAGGCGAAACGTTGGGAAAATACAGTGCATAGACCTGAAATACATAAATTCTTAGGTGCTTTGACTGATAGAAAAGCTAAAAAAGGAGTTTTTATTGCTACATCTGATTTTAGTACAGAACTTGAGGAAAAGAATATGACAACTACGAATTATACGGAGCTCTCCAATTCAGACGATTGTGAAAAACACGTAAATCAGTTTATTCAGGAATTTCCTTTGCGTAGTGTAACAATTGGGCAGGGGACAGTGATTAAACGTGCATTGCCAAGTCGTCATAAGCGTTTAATTGGAGCATGGTGTTTTTTAGATCATGCAGGTCCTGTGACTTTTCCACAAGGTGATGGTTTAGATGTCGGTCCGCACCCGCATATTGGTTTGCAAACGTTTACTTGGATGCTAGAAGGCACCATGATTCATACCGATAGTTTGGGAACAAAGCAATTGATTTGCCCTAAACAGGTCAATTTGATGACGGCAGGTTATGGTATTTCACATACAGAGGTTGCCCCAGAAACTGAAACGCAGATGCATGCGGCTCAGCTTTGGATTGCATTGCCCGATGATAAAATAAATATAGCACCACGATTTGACCACTATCCTGAACTTCCTGTGGTGGAAAAAGATCAAGTCGAATTTACAGTATTGGTTGGTGAATTTTTACAAACAAAATCACCTGTGCTGGTGCATACAGAATTATTGGGTGTAGATTTAACCGCAAAAGAATCAACCACGACTCGGCTTACGCTAAATCCAAAATTTGAATATGGTTTTATGGCTTTGGAAGGGGGTGCTGTGGTGAACGGTCATGAATTGACTGACGATAATATGGTGGTACTCGAAACTGGCATCACTGAAATTAACATTGAATTACATGCAGGCAGTCGTATTTTATTGTTGGGCGGCGAACCTTTTGAATCCCCGATATTGCTATGGTGGAACTTTGTTGGGCGTACGCAAGAGGAACTTGAGCTTGCTCGTGAGCAATGGGTTAATCAGGATGAGCGTTTTGGTCAGATTACTGATTATCAAGGTCCTCGTTTAGAAGCACCTGTCTTTCCAGATAAAATGCGTGCTTCCCGATAA	1197	0.4119	MGYGGSHQDAAQAIGKTNDGGIDGIISEDRLGLDKIYIQAKRWENTVHRPEIHKFLGALTDRKAKKGVFIATSDFSTELEEKNMTTTNYTELSNSDDCEKHVNQFIQEFPLRSVTIGQGTVIKRALPSRHKRLIGAWCFLDHAGPVTFPQGDGLDVGPHPHIGLQTFTWMLEGTMIHTDSLGTKQLICPKQVNLMTAGYGISHTEVAPETETQMHAAQLWIALPDDKINIAPRFDHYPELPVVEKDQVEFTVLVGEFLQTKSPVLVHTELLGVDLTAKESTTTRLTLNPKFEYGFMALEGGAVVNGHELTDDNMVVLETGITEINIELHAGSRILLLGGEPFESPILLWWNFVGRTQEELELAREQWVNQDERFGQITDYQGPRLEAPVFPDKMRASR	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo147g00167	398	CDD	cupin_pirin_N	122	224	-	-
	Pumo147g00167	398	Pfam	Pirin	124	221	IPR003829	-
	Pumo147g00167	398	SUPERFAMILY	Restriction endonuclease-like	14	81	IPR011335	-
	Pumo147g00167	398	Gene3D	Jelly Rolls	117	367	IPR014710	-
	Pumo147g00167	398	Gene3D	-	1	105	IPR011856	GO:0003676
	Pumo147g00167	398	Pfam	Restriction endonuclease	1	82	IPR007560	GO:0003677\|GO:0004519\|GO:0009307
	Pumo147g00167	398	Pfam	Pirin C-terminal cupin domain	273	370	IPR008778	-
	Pumo147g00167	398	Gene3D	Jelly Rolls	241	342	IPR014710	-
	Pumo147g00167	398	SUPERFAMILY	RmlC-like cupins	117	382	IPR011051	-
	Pumo147g00167	398	PANTHER	PIRIN-RELATED	101	375	IPR012093	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo147g00167	117	374	Calmodulin-binding Proteins	AT3G59220	29.699	1.56e-26	105

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo147g00167	K06911		-	acb:A1S_0134	505.368