LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo147g00153	ATGAGTGACAATATCATCCATGCTTATGCCGCGATGCAGGCAGGAGCAGACCTTGAAGCGTATCAGTTTGATGCAGGCGAACTGCAAGCCCATCAAGTTGAAGTAAAAGTTGAATATTGTGGTTTATGCCATTCTGATATTTCAGTGATTAATAATGACTGGCATTCTTCGGTGTATCCTGTGGTTGCAGGGCATGAAATTATTGGTACGATTACTCAGTTGGGTTCCGAAGCCAAAGGGCTAAAAGTCGGGCAACGTGTCGGCATTGGTTGGACTGCTGAAAGTTGCCAACATTGTGATCCTTGTGTGTCGGGACAACCAGTGCTCTGCACAGGCGGACAAACAGCGACCATTGTGGGGCATGCAGGAGGCTTTGCCGATAAAGTTCGTGCAGGCTGGCAATGGGTGATTCCGCTCCCTGAAAATTTAGATCCAGAAAGTGCAGGTCCTTTGCTGTGTGGTGGTATTACCGTATTTGACCCAATTGTTGCACATCAAATTCAAGCCACTCACCATGTCGGCGTGATTGGAATTGGCGGGTTAGGTCACATCGCCATTAAACTGCTGAAAGCTTGGGGCTGTGAAATTACCGCCTTTACCTCCAGTTTAGACAAAACAGATGAACTGAAAGCCATGGGTGCTGACCATGTGCTCAATAGTCGTGATGCAGCGGTACTTAAAGCCCAACATGGAAAATTTGATTTGTTGCTGTGTACAGTCAACGTCACTTTAGACTGGGCGGCGTATTTAAATACGCTTGCACCGCATGGCACGATCCACATGTTAGGTTTAGTCCTTGAGCCGATGCAAATTCCTGCGGGCATGCTCATTGGCGGTGCTAAATCGGTTACAGGTTCACCGACAGGCTCGCCTGCTGCACTACGCCAATTACTCAAGTAA	900	0.4789	MSDNIIHAYAAMQAGADLEAYQFDAGELQAHQVEVKVEYCGLCHSDISVINNDWHSSVYPVVAGHEIIGTITQLGSEAKGLKVGQRVGIGWTAESCQHCDPCVSGQPVLCTGGQTATIVGHAGGFADKVRAGWQWVIPLPENLDPESAGPLLCGGITVFDPIVAHQIQATHHVGVIGIGGLGHIAIKLLKAWGCEITAFTSSLDKTDELKAMGADHVLNSRDAAVLKAQHGKFDLLLCTVNVTLDWAAYLNTLAPHGTIHMLGLVLEPMQIPAGMLIGGAKSVTGSPTGSPAALRQLLK	299

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo147g00153	299	Gene3D	-	16	153	-	-
	Pumo147g00153	299	CDD	CAD1	7	299	IPR047109	GO:0016616
	Pumo147g00153	299	ProSitePatterns	Zinc-containing alcohol dehydrogenases signature.	64	78	IPR002328	GO:0008270\|GO:0016491
	Pumo147g00153	299	FunFam	Cinnamyl alcohol dehydrogenase	154	299	-	-
	Pumo147g00153	299	Pfam	Alcohol dehydrogenase GroES-like domain	31	138	IPR013154	-
	Pumo147g00153	299	SUPERFAMILY	GroES-like	8	163	IPR011032	-
	Pumo147g00153	299	FunFam	NAD(P)-dependent alcohol dehydrogenase	11	172	-	-
	Pumo147g00153	299	ProSitePatterns	D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.	173	200	IPR029752	-
	Pumo147g00153	299	PANTHER	ALDEHYDE REDUCTASE	8	298	IPR047109	GO:0016616
	Pumo147g00153	299	Pfam	Zinc-binding dehydrogenase	180	298	IPR013149	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo147g00153	10	279	Monolignol Biosynthesis Gene Families	AT4G37980	35.612	2.12e-50	167

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo147g00153	K12957		-	acb:A1S_3436	481.485

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