Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00153 ATGAGTGACAATATCATCCATGCTTATGCCGCGATGCAGGCAGGAGCAGACCTTGAAGCGTATCAGTTTGATGCAGGCGAACTGCAAGCCCATCAAGTTGAAGTAAAAGTTGAATATTGTGGTTTATGCCATTCTGATATTTCAGTGATTAATAATGACTGGCATTCTTCGGTGTATCCTGTGGTTGCAGGGCATGAAATTATTGGTACGATTACTCAGTTGGGTTCCGAAGCCAAAGGGCTAAAAGTCGGGCAACGTGTCGGCATTGGTTGGACTGCTGAAAGTTGCCAACATTGTGATCCTTGTGTGTCGGGACAACCAGTGCTCTGCACAGGCGGACAAACAGCGACCATTGTGGGGCATGCAGGAGGCTTTGCCGATAAAGTTCGTGCAGGCTGGCAATGGGTGATTCCGCTCCCTGAAAATTTAGATCCAGAAAGTGCAGGTCCTTTGCTGTGTGGTGGTATTACCGTATTTGACCCAATTGTTGCACATCAAATTCAAGCCACTCACCATGTCGGCGTGATTGGAATTGGCGGGTTAGGTCACATCGCCATTAAACTGCTGAAAGCTTGGGGCTGTGAAATTACCGCCTTTACCTCCAGTTTAGACAAAACAGATGAACTGAAAGCCATGGGTGCTGACCATGTGCTCAATAGTCGTGATGCAGCGGTACTTAAAGCCCAACATGGAAAATTTGATTTGTTGCTGTGTACAGTCAACGTCACTTTAGACTGGGCGGCGTATTTAAATACGCTTGCACCGCATGGCACGATCCACATGTTAGGTTTAGTCCTTGAGCCGATGCAAATTCCTGCGGGCATGCTCATTGGCGGTGCTAAATCGGTTACAGGTTCACCGACAGGCTCGCCTGCTGCACTACGCCAATTACTCAAGTAA 900 0.4789 MSDNIIHAYAAMQAGADLEAYQFDAGELQAHQVEVKVEYCGLCHSDISVINNDWHSSVYPVVAGHEIIGTITQLGSEAKGLKVGQRVGIGWTAESCQHCDPCVSGQPVLCTGGQTATIVGHAGGFADKVRAGWQWVIPLPENLDPESAGPLLCGGITVFDPIVAHQIQATHHVGVIGIGGLGHIAIKLLKAWGCEITAFTSSLDKTDELKAMGADHVLNSRDAAVLKAQHGKFDLLLCTVNVTLDWAAYLNTLAPHGTIHMLGLVLEPMQIPAGMLIGGAKSVTGSPTGSPAALRQLLK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00153 299 Gene3D - 16 153 - -
Pumo147g00153 299 CDD CAD1 7 299 IPR047109 GO:0016616
Pumo147g00153 299 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Pumo147g00153 299 FunFam Cinnamyl alcohol dehydrogenase 154 299 - -
Pumo147g00153 299 Pfam Alcohol dehydrogenase GroES-like domain 31 138 IPR013154 -
Pumo147g00153 299 SUPERFAMILY GroES-like 8 163 IPR011032 -
Pumo147g00153 299 FunFam NAD(P)-dependent alcohol dehydrogenase 11 172 - -
Pumo147g00153 299 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 173 200 IPR029752 -
Pumo147g00153 299 PANTHER ALDEHYDE REDUCTASE 8 298 IPR047109 GO:0016616
Pumo147g00153 299 Pfam Zinc-binding dehydrogenase 180 298 IPR013149 -
Pumo147g00153 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 143 298 IPR036291 -
Pumo147g00153 299 Gene3D - 154 299 - -
Pumo147g00153 299 SMART PKS_ER_names_mod 15 298 IPR020843 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00153 10 279 Monolignol Biosynthesis Gene Families AT4G37980 35.612 2.12e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00153 K12957 - acb:A1S_3436 481.485