Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00117 ATGGCCTCATTTGAATTTTTAGAAGATGATCAAAACGATAGCAACGGTCAAGCCCGTTTCACTGTATTTGGTGTAGGTGGTGCTGGTGGTAACGCTGTGCAGCATATGCTTGAGTCAGATATTCAAGGCGTTAAATTTGTTTGTGCCAATACCGACAAACAAGCATTAGACCGCATGAATGCTCAATTCAAAATACAGTTAGGTGAGCAAAGTACCCGTGGTTTAGGTGCTGGTGCAAATCCTCAAGTGGGTCAAACTGCTGCTGAAGAGAGCCGTGAAATCATTCGCCAACACCTTGAAGGTACAGACATGGTGTTTGTAACTGCGGGTATGGGCGGTGGTACTGGCACAGGTGCTGCACCTGTGGTTGCTGAAATTGCAAAAGAAATGGGAATTTTAACGGTTGGGGTTGTGACTACACCGTTTAATTTTGAAGGAAAACGTCGTCAACAATCTGCTGAAAAAGGCATTGAAGCTTTAGAAGCACACGTAGACTCTTTAATTATTATTCCGAATCAACGTTTGCTTAAAGTCTTCCGTGATATTTCAATGAAAGACGCGTATAAAAAAGCAGACGATGTATTGTTGAATGCAGTACGTAGTATTTTTGATCTTGTGGTTCGTCCGGGTCATATTAACCTTGACTTCGCCGATTTAAAAACTGCAATGAGCACACGTGGTTATGCCATGATGGGCGTAGGTTCGGGTCGTGGTGAAACACGTGCACGTCAAGCCGCTGAACAAGCAATTCGTAGCCCATTGCTCGACAATGTGACCATTATGAATGCCAAAGGTATTTTAATTAATGTCACAGGCGGTGATGATGTGACCTTCGGTGAAATTGAAGAAATTACCGATGTAGTGAATCAAATTGTCGATTTGGATGAAGGTCAAGTCTTCTACGGAACAGTATTTGATCCAGATGCACGTGATGAACTTAGCGTTACTGTGATTGCAACAGGCTTAACCCGTAACTCAGCCGAGGCTGTAAATACGGTAAAACGTCCAACACATGCTACTTCGCGTCCAACCAACCCATCTATGTCTACCCAGACTGTTGTTGAAGATGATGATGTCCCTGCGATTCAGCGTCAACATAGCGAAGCGAATGCTGTAGCTGCACCAGCAGCAGGAACAGCACATGATGGAAACATGTTGAAACAAAGAACCCTGAAACGCATCGTGAAAGCGAGCGGAATTGGTCTTCATAGTGGGCAAAAAGTCTTAATTAACTTTGTGCCACATCATGCGGATGGGGGAATTGTGTTTCGACGTATTGATTTAGACCCACCCATCGACATTCCAGCAGATGCGATGCTCATTCAAGAAGCCTTTATGTGTTCTAACTTGGTGCAAGAAAATGCCAAGGTGGGCACCGTTGAACACGTGATGAGTGCCATCGCAGGTTTGGGAATTGATAATTTAATTGTAGAAGTGTCTGCTTCAGAAGTTCCGATTATGGATGGTAGTGCAGGTCCATTTATTTATTTGCTTATGCAAGGCGAGTTAGCCGAACAAAATGCCCCGAAAAAATTTATAAGAATTTTAAAACCCGTAGAAGCATTAATTGATGATAAGCGTGCTATTTTTCATCCACATGAAGGTTTCCAGTTAAATTTCACCATCGATTTTGATCATCCCGCATTTAAAAAAGAATATCAGTCAGCCACTATTGATTTTTCAACCGAAACTTTTGTTTATGAAGTTAGTGGTGCGCGTACTTTTGGTTTTATGAAAGATTTAGACTATCTAAAAGCCAATAATTTAGCTTTAGGGGCGAGTTTAGATAATGCTATTGGCGTAGATGATACGGGCGTTGTGAATGAAGAAGGACTACGTTTTTCGGATGAGTTTGTGCGTCATAAAATTTTAGATGCAGTGGGGGATTTGTACTTGCTCGGACATCAAATTATTGCAAAATTTGATGGATATAAATCAGGTCATGCCTTAAATAATCAGTTATTACGCAATGTTAAAGCTGATCCTACCAGTTATGAAATTGTAACATTTGATGACACATCACACTGTCCAATTCCTTATGTGAGCGTGACATAA 2055 0.4161 MASFEFLEDDQNDSNGQARFTVFGVGGAGGNAVQHMLESDIQGVKFVCANTDKQALDRMNAQFKIQLGEQSTRGLGAGANPQVGQTAAEESREIIRQHLEGTDMVFVTAGMGGGTGTGAAPVVAEIAKEMGILTVGVVTTPFNFEGKRRQQSAEKGIEALEAHVDSLIIIPNQRLLKVFRDISMKDAYKKADDVLLNAVRSIFDLVVRPGHINLDFADLKTAMSTRGYAMMGVGSGRGETRARQAAEQAIRSPLLDNVTIMNAKGILINVTGGDDVTFGEIEEITDVVNQIVDLDEGQVFYGTVFDPDARDELSVTVIATGLTRNSAEAVNTVKRPTHATSRPTNPSMSTQTVVEDDDVPAIQRQHSEANAVAAPAAGTAHDGNMLKQRTLKRIVKASGIGLHSGQKVLINFVPHHADGGIVFRRIDLDPPIDIPADAMLIQEAFMCSNLVQENAKVGTVEHVMSAIAGLGIDNLIVEVSASEVPIMDGSAGPFIYLLMQGELAEQNAPKKFIRILKPVEALIDDKRAIFHPHEGFQLNFTIDFDHPAFKKEYQSATIDFSTETFVYEVSGARTFGFMKDLDYLKANNLALGASLDNAIGVDDTGVVNEEGLRFSDEFVRHKILDAVGDLYLLGHQIIAKFDGYKSGHALNNQLLRNVKADPTSYEIVTFDDTSHCPIPYVSVT 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00117 684 SMART Tubulin_C_4 212 331 IPR018316 -
Pumo147g00117 684 ProSitePatterns FtsZ protein signature 2. 103 124 IPR020805 GO:0005525
Pumo147g00117 684 Gene3D lpxc deacetylase, domain 2 512 684 IPR011334 GO:0008759|GO:0009245
Pumo147g00117 684 FunFam Cell division protein FtsZ 10 225 - -
Pumo147g00117 684 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 12 338 IPR045061 GO:0003924|GO:0005525
Pumo147g00117 684 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 386 681 IPR004463 GO:0008759|GO:0009245
Pumo147g00117 684 NCBIfam cell division protein FtsZ 8 334 IPR000158 GO:0003924|GO:0005525
Pumo147g00117 684 Gene3D Tubulin/FtsZ, GTPase domain 9 225 IPR036525 -
Pumo147g00117 684 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 388 658 IPR004463 GO:0008759|GO:0009245
Pumo147g00117 684 SUPERFAMILY Ribosomal protein S5 domain 2-like 517 662 IPR020568 -
Pumo147g00117 684 PRINTS Cell division protein FtsZ signature 132 153 IPR003008 GO:0005525
Pumo147g00117 684 PRINTS Cell division protein FtsZ signature 217 238 IPR003008 GO:0005525
Pumo147g00117 684 PRINTS Cell division protein FtsZ signature 104 124 IPR003008 GO:0005525
Pumo147g00117 684 PRINTS Cell division protein FtsZ signature 194 216 IPR003008 GO:0005525
Pumo147g00117 684 SUPERFAMILY Tubulin nucleotide-binding domain-like 18 213 IPR036525 -
Pumo147g00117 684 Gene3D lpxc deacetylase, domain 1 385 511 IPR015870 GO:0008759|GO:0009245
Pumo147g00117 684 Pfam FtsZ family, C-terminal domain 227 322 IPR024757 -
Pumo147g00117 684 SUPERFAMILY Ribosomal protein S5 domain 2-like 387 509 IPR020568 -
Pumo147g00117 684 Hamap UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 386 663 IPR004463 GO:0008759|GO:0009245
Pumo147g00117 684 SUPERFAMILY Tubulin C-terminal domain-like 209 325 IPR008280 -
Pumo147g00117 684 CDD FtsZ_type1 35 321 IPR000158 GO:0003924|GO:0005525
Pumo147g00117 684 ProSitePatterns FtsZ protein signature 1. 50 84 IPR020805 GO:0005525
Pumo147g00117 684 Gene3D - 226 338 IPR037103 -
Pumo147g00117 684 SMART Tubulin_4 19 210 IPR003008 GO:0005525
Pumo147g00117 684 Pfam Tubulin/FtsZ family, GTPase domain 21 178 IPR003008 GO:0005525
Pumo147g00117 684 Hamap Cell division protein FtsZ [ftsZ]. 15 378 IPR000158 GO:0003924|GO:0005525
Pumo147g00117 684 MobiDBLite consensus disorder prediction 330 351 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00117 369 661 Carbohydrate Esterase AT1G25054 31.210 4.02e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00117 - - acb:A1S_3331 570.466