Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00108 ATGGGTGTTGAGATTTATTCTGTTTCAACCGATACCCATTTCACTCATAAAGCTTGGCATGACAGTTCCGATGAAATTGGCAAAATCCAATACGCTATGGTAGGTGACCCAACATGGGCGCTGGCTAAAAACTTTGAGGTCTTGATTGAATCGGAAGGCTTGGCAGATCGTGGTACTTTCGTGATTGATCCAGAAGGAAAAATCCAAATTATTGAAATCAATGCAGGTGGTATTGGTCGAGATGCGCAAGAACTGCTTCGTAAAGTGAAAGCAGCACAATATGTTTATTCACACCCTGGTGAAGTTTGCCCAGCAAAATGGAAAGAAGGCGATACTACGCTTACTCCTTCAATTGATTTAATTGTCACACTGGCTTATCAGGGTGAAGTTTCGCATCGGGACTCAAGTGGTGGTGGCGGTCAGATCAAAGCAGGGGATGTGCAATGGATGACGGCTGGAGCGGGTCTGGTGCATGAAGAATTTCATTCTGAAGAATTTGCCAAACATGGCGGATTGTTTGAAATGGTTCAGCTTTGGGTGAATTTACCTGCGGCACATAAAATGACACCGCCGAAATATCAAAGTATTGCAGCACAGAATATTCCAGTGATTGAACTGCAAGATGGGGCAGGTCATATCCGCGTCATTGCAGGTGAGTATGAACAACATGCGGGTCCTGCTTCAACATATAGCCCTGTTAATGTTTGGGATGGTGAGTTGAAAGCAGATCATGTGCATCATTTTCATGTGCCTGTACAACATACGACTTTGCTGGTGCTGTTGTCGGGTGAGCTTATGTTGAATGGTACACAGCGTGTGCAAGACAGCTCTATTGTCATGTTTGCGCAAGATGATGATACTGAAATTCAATTACAAGCCCTTCAAGAGAGTAAATTTTTGCTTCTGACAGGACAACCTTTGAATGAACCTATTCAAGGTTATGGTCCATTTGTCATGAATACTAAAGATGAAATTACGCAAGCTTTTCATGACTTTAATGAAGTTATTGGTAGCGGTATGGCTGGGCTAGCTACCGCAAGAATTCTTAAAGATGCAGGACATCGCATTACTATTTTTGAAGCATTGCCTGGACGTGGTATGGATAGCCATAGCACTGAATTTGAAGGTGGATTAATTGATGCACCTTTACGTGTGATGAATCCACATTTGTGGAAAAATACCCTCAGTTTGGCAACCTACTTAGGTATACACACTTTCCCTGTGCGTACATATATGGCATGTAGCTGGCTATTTGAAGACCGTACTGAAACATGGTTAACCACAACCCGTAGTCGAATTGGTAATTTCCCGATTATTAATAATCGCAAAGGCATTCAGCAGTATGGTTGGCGCTTAGTGAAAGGCATGCTGCAACTTAAAACGGCGTTGGCTAAGTTCTTTAAATCGGAAAATCAAGAGATTACGCTTGCCGAATTTATTAATCATAACGATATTGAAGACGTTTTTTGGCATGGTGCAGTGATGCCTGTGCTGTATACCATTTGTACGTGTAACCCTAAAACCATTGGTGAATGGCCAGCAAAACCGCTTTTGACCTTTTTACGTCAATTGACGGATGGTGATGCTTTATTGCGTATGCAAGGTGGCACACCTGCTTTAGTCGACAAGCTCATTGAAGGGATTGAAATTCATAACGGCGCTGCAATTACCCAAGTCAAAGAACAAGATCAAGGTGTACTCGTTGAAAATTCTTTAGGTGAACAGTACATTTTTGATCGGGTGATTGTGGCAACACCGACCAATAAAATTGAAAATTTTTTAAATAACCAACAATTTGCCGATGATATTGCGTTGTTAAAGCAATTCAAATTTGAAGAAGGGCAATTGGTCATTCATACTGATCAAACCGTCATGCCTCCAAAACGCAAAGATTGGGCTGTTCTCAGTTATATGATGGATCGTCAATTTACCCGTCAACAATTTACAGTGTGGTTAAATTCGGTTGAACCAAGTTTAGTGGGCAAAACAGCCATTTTCCAAACATGGCGACCTGTGACGCCTATTGATCCTAAAAAAGTCATTTCAAGCGTGACCTTAACGCGCGCTGTGGTCGATTCACAAACGGTGGCGTTAAATAAAGAGTTGCAATTACGCCATAAAGATCTGAACCGTAAAGTATTCTATTGTGGTTCATGGTCGTGTGATGGTTTACCTATTTTAGAATCGGCAGTGACTTCAGCCATGCACATTGCAGAAATTTTTAATGCACCCTTGCCGTTTGTTGGATTAAAACCTAAAGTCGAGTTAGGGGATGATACAGCGTTGCCTTGGAGCAACCTAGGTTACTGGGATGATGCAAAGTCATCCTATCCTGATGCTTGTTGCCATTTAGCAGATCACTTGGCGCAAGCTGTGCATTTAGACGGTAATGATCGATTGCTTGATTTAGGCTGTGGGCAGGGAGCAAGTCTGCTTCATTGGCAGCAGCACTATCAGCTCAAAGATATTGAAGCGGTTGAACTACAATCCACCTATGTTATGCACATTCAAAAACAGCTTCCACATCTTTCTGCAATTCATCAGCAATCTTTTTTAAATTTAAAGCAGATTGCATTTCAACGGAAATTTGATGTGGTGCTGTGTATTGATGCCGCTTATCACTCCAATCTGAATTTATTTTTAGATTCAGTTGCTTTGGTTTTAAATTCAAATGGTAGGTTAGGTTTTCATTACTTAATGTTATCTGACAAATGGTTTAAGTTAAATTCATTGCAACAGAAAAAATATCAATGGTTATTAAAGTCCGCCGATGTGAATTTAGATCATTTAATGACACAAGCGATGCTCATGCAAAATTTACAGCAGCAAGGTTTTCAAGAGATTCAAATTGACGATTTATCTTCAGGCGTTTTACGCGGATTTGCACATTATATTCAGTCATTGCCACGACAGGCGTTCAATTTGGATACAGTGAAAATTCGGATGACAGCCAAGTTATGCCATAAGCTGTATAACGATGGTTTAGTGAACTATGTTCAAATCAGTGCAAAAAAACCATAA 3021 0.4085 MGVEIYSVSTDTHFTHKAWHDSSDEIGKIQYAMVGDPTWALAKNFEVLIESEGLADRGTFVIDPEGKIQIIEINAGGIGRDAQELLRKVKAAQYVYSHPGEVCPAKWKEGDTTLTPSIDLIVTLAYQGEVSHRDSSGGGGQIKAGDVQWMTAGAGLVHEEFHSEEFAKHGGLFEMVQLWVNLPAAHKMTPPKYQSIAAQNIPVIELQDGAGHIRVIAGEYEQHAGPASTYSPVNVWDGELKADHVHHFHVPVQHTTLLVLLSGELMLNGTQRVQDSSIVMFAQDDDTEIQLQALQESKFLLLTGQPLNEPIQGYGPFVMNTKDEITQAFHDFNEVIGSGMAGLATARILKDAGHRITIFEALPGRGMDSHSTEFEGGLIDAPLRVMNPHLWKNTLSLATYLGIHTFPVRTYMACSWLFEDRTETWLTTTRSRIGNFPIINNRKGIQQYGWRLVKGMLQLKTALAKFFKSENQEITLAEFINHNDIEDVFWHGAVMPVLYTICTCNPKTIGEWPAKPLLTFLRQLTDGDALLRMQGGTPALVDKLIEGIEIHNGAAITQVKEQDQGVLVENSLGEQYIFDRVIVATPTNKIENFLNNQQFADDIALLKQFKFEEGQLVIHTDQTVMPPKRKDWAVLSYMMDRQFTRQQFTVWLNSVEPSLVGKTAIFQTWRPVTPIDPKKVISSVTLTRAVVDSQTVALNKELQLRHKDLNRKVFYCGSWSCDGLPILESAVTSAMHIAEIFNAPLPFVGLKPKVELGDDTALPWSNLGYWDDAKSSYPDACCHLADHLAQAVHLDGNDRLLDLGCGQGASLLHWQQHYQLKDIEAVELQSTYVMHIQKQLPHLSAIHQQSFLNLKQIAFQRKFDVVLCIDAAYHSNLNLFLDSVALVLNSNGRLGFHYLMLSDKWFKLNSLQQKKYQWLLKSADVNLDHLMTQAMLMQNLQQQGFQEIQIDDLSSGVLRGFAHYIQSLPRQAFNLDTVKIRMTAKLCHKLYNDGLVNYVQISAKKP 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00108 1006 Gene3D Glutaredoxin 1 121 - -
Pumo147g00108 1006 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 766 1006 IPR029063 -
Pumo147g00108 1006 Pfam Flavin containing amine oxidoreductase 340 596 IPR002937 GO:0016491
Pumo147g00108 1006 Pfam Pirin 121 180 IPR003829 -
Pumo147g00108 1006 Gene3D Jelly Rolls 202 307 IPR014710 -
Pumo147g00108 1006 SUPERFAMILY FAD/NAD(P)-binding domain 335 739 IPR036188 -
Pumo147g00108 1006 Gene3D Jelly Rolls 122 333 IPR014710 -
Pumo147g00108 1006 Gene3D Vaccinia Virus protein VP39 757 1005 IPR029063 -
Pumo147g00108 1006 Gene3D - 335 603 IPR036188 -
Pumo147g00108 1006 PANTHER QUERCETIN 2,3-DIOXYGENASE 96 334 - -
Pumo147g00108 1006 Pfam C-terminal domain of 1-Cys peroxiredoxin 92 120 IPR019479 GO:0051920
Pumo147g00108 1006 CDD AdoMet_MTases 799 899 - -
Pumo147g00108 1006 CDD cupin_pirin_C 232 306 - -
Pumo147g00108 1006 Pfam AhpC/TSA family 2 69 IPR000866 GO:0016209|GO:0016491
Pumo147g00108 1006 Pfam Pirin C-terminal cupin domain 236 334 IPR008778 -
Pumo147g00108 1006 SUPERFAMILY RmlC-like cupins 121 334 IPR011051 -
Pumo147g00108 1006 SUPERFAMILY Thioredoxin-like 2 120 IPR036249 -
Pumo147g00108 1006 Pfam Methyltransferase domain 795 908 IPR025714 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00108 122 332 Calmodulin-binding Proteins AT3G59220 37.674 1.24e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00108 K06911 - aci:ACIAD3443 738.799