Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00106 ATGAATAAATATCTTGCAGAATTCATTGGAACATTTTGGTTGGTCTTTGGCGGATGTGGAAGTGCTGTTATTGCAGCCGCTTTTCCAGAGCTAGGTATTGGTTTTGTTGGTGTATCACTCGCCTTTGGTTTAACTGTACTTACAGGTGCTTATGCTTTAGGTCATATTTCTGGAGGGCATTTTAACCCCGCCGTGAGTGTAGGCTTATGGTTTGCGGGTCGTTTTGATGCCAAAGATCTTATTCCCTATGTGATTTCTCAAATCCTTGGCGGAACTTTAGCGGCACTGGCGCTCTATATGATTGTACAAGGTCAGGCTGATTTTGTCGGTACAGGCGCTTTTGCAAGCAATGGATTTTCAGAATTATCACCCGCAAAATACTCTATGGCATCCGCATTAATGATTGAAATTATATTAACGGCTGTGTTTTTAATTGTCATTTTAGGATCAACCGATAAACGTGCCCCCGCTGGTTTTGCACCCATTGCAATTGGCTTGGCTTTAACCTTAATCCATCTGATCAGTATTCCCGTGACCAATACCTCGGTTAATCCTGCCCGTAGTACAGCCGTCGCATTTTTTGCAGAAACGGCGGCGCTCAGTCAACTTTGGTTATTTTGGCTTGCGCCTATTCTAGGTTCAATCATTGGTGCATTTATTTATAAAACTGTTTCAGTCAATCATGACAGAAATTAA 696 0.4224 MNKYLAEFIGTFWLVFGGCGSAVIAAAFPELGIGFVGVSLAFGLTVLTGAYALGHISGGHFNPAVSVGLWFAGRFDAKDLIPYVISQILGGTLAALALYMIVQGQADFVGTGAFASNGFSELSPAKYSMASALMIEIILTAVFLIVILGSTDKRAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAFFAETAALSQLWLFWLAPILGSIIGAFIYKTVSVNHDRN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00106 231 PRINTS Major intrinsic protein family signature 42 66 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 PRINTS Major intrinsic protein family signature 165 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 PRINTS Major intrinsic protein family signature 2 21 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 PRINTS Major intrinsic protein family signature 135 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 PRINTS Major intrinsic protein family signature 204 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pumo147g00106 231 Pfam Major intrinsic protein 2 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 CDD MIP 3 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 Hamap Aquaporin Z [aqpZ]. 1 228 IPR023743 GO:0006833|GO:0015250|GO:0016020|GO:0055085
Pumo147g00106 231 SUPERFAMILY Aquaporin-like 2 227 IPR023271 -
Pumo147g00106 231 NCBIfam MIP family channel protein 6 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo147g00106 231 Gene3D Glycerol uptake facilitator protein. 1 226 IPR023271 -
Pumo147g00106 231 PANTHER AQUAPORIN TRANSPORTER 3 228 IPR034294 -
Pumo147g00106 231 FunFam Aquaporin Z 1 229 - -
Pumo147g00106 231 ProSitePatterns MIP family signature. 60 68 IPR022357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00106 2 224 Major Intrinsic Protein MIP AT5G37810 35.111 2.68e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00106 K06188 - acb:A1S_3248 374.785