Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00098 ATGCTACTTGCGCTCAGTTTATCTGGCGCGCTTTTGGGTGGTTCTGTTGCATGGGCTGAAGACGCCGTGACAGCACCTACTGCTGCTGAAGATATTACAGTTCAAGCGACAGACTCATCAGTTACAAATTCTGCACTCGCTGCAACAGCGACAGCAACGGAACAAACACCAACACCAGTAGAAGAACAACCTAAATTAGATACTGGTGATACTGCATGGATTTTAGTGTCTACAGCACTTGTTTTACTCATGACGATTCCTGGTCTGGCATTGTTTTATGGCGGTATGGTGCGTAAGAAAAATGTACTCAGTACCATGGCACATAGCTTTGTTGCTGCCGCAATTGTCAGTATTACGTGGGTGGTTATTGGCTATACCTTAGCCTTTGGTACAGGAAATGCGTTCATCGGTAACGTTGATAAAATTATGTTGTCGGGTATTACGACCACTGCCTTAACTGGAACAATTCCAGAAATTTTATTCGTTATTTTCCAAATGACCTTTGCCATTATTACGGTCGCGATTATTACAGGTTCGATTGCTGAACGAATGAAATTCAGCGCTTTTGTTGCCTTTGTGACAATTTGGAGTGTGGTGGTTTATGCACCTATTACCCACTGGGTCTGGGGTGGCGGTTGGTTAGCCAGTGATGGTGCGTTGGATTTTGCGGGGGGAACGGTCGTTCATATTAACGCAGGTGTTGCAGGTTTAGTGGCTGCATACATGCTGGGTAAACGTATGGGCTTGGGTCGTGAATCAATGGCACCTCATAATTTGGCTTTAACTGTAATTGGTGCAAGTTTAGTGTGGGTGGGTTGGTTCGGATTTAATGGCGGTTCTGCATTGGGTGCGAATGGTTCAGCAAGTTATGCCTTAATTGTGACTCAAGTTGCAGCCGCAGCAGCCGCAATTTCATGGTTAATCACTGAAAAAGTGGTTCGTGGTAAAGCCTCTGTATTAGGCGGTGCATCTGGTGCAGTTGCTGGTCTGGTTGTGATTACTCCCGCAGCAGGTTTCGTCACTGTGGGCGGTGCATTGGCGATGGGTCTGATTGGCGGTGTCGTGTGTTTCTGGGGAATTACTGCACTTAAACGTATTCTTAAAGCCGATGATTCTTTAGATGCTTTTGGTTTGCATGGCGTGGGCGGTATTGTAGGTGCAATTTTAACCGCAGTCTTTGCCAGTGACTTCATTATGGGAGAGAAAGTCCCAACAGATATGTTGCATCAATTATGGGTGCAAATGGAAGGGGTACTTGCAACAATAGCTTACTCGGCAATATTGACTTATATCATTCTTAAAGTGATTGATGTGGTGATTGGTATTCGTGTCAGTGCTGACGATGAACGCATGGGGCTAGATTTAAGTCAACATGGCGAACGCGTAGAATAA 1392 0.454 MLLALSLSGALLGGSVAWAEDAVTAPTAAEDITVQATDSSVTNSALAATATATEQTPTPVEEQPKLDTGDTAWILVSTALVLLMTIPGLALFYGGMVRKKNVLSTMAHSFVAAAIVSITWVVIGYTLAFGTGNAFIGNVDKIMLSGITTTALTGTIPEILFVIFQMTFAIITVAIITGSIAERMKFSAFVAFVTIWSVVVYAPITHWVWGGGWLASDGALDFAGGTVVHINAGVAGLVAAYMLGKRMGLGRESMAPHNLALTVIGASLVWVGWFGFNGGSALGANGSASYALIVTQVAAAAAAISWLITEKVVRGKASVLGGASGAVAGLVVITPAAGFVTVGGALAMGLIGGVVCFWGITALKRILKADDSLDAFGLHGVGGIVGAILTAVFASDFIMGEKVPTDMLHQLWVQMEGVLATIAYSAILTYIILKVIDVVIGIRVSADDERMGLDLSQHGERVE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00098 463 ProSitePatterns Ammonium transporters signature. 221 246 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pumo147g00098 463 SUPERFAMILY Ammonium transporter 66 444 - -
Pumo147g00098 463 NCBIfam ammonium transporter 70 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pumo147g00098 463 FunFam Ammonium transporter 54 462 - -
Pumo147g00098 463 PRINTS Rhesus blood group protein signature 346 364 IPR002229 GO:0005886
Pumo147g00098 463 PRINTS Rhesus blood group protein signature 260 278 IPR002229 GO:0005886
Pumo147g00098 463 PRINTS Rhesus blood group protein signature 291 313 IPR002229 GO:0005886
Pumo147g00098 463 PRINTS Rhesus blood group protein signature 165 181 IPR002229 GO:0005886
Pumo147g00098 463 PANTHER AMMONIUM TRANSPORTER MEP2 60 461 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pumo147g00098 463 Pfam Ammonium Transporter Family 72 461 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pumo147g00098 463 Gene3D Ammonium transporter AmtB like domains 44 463 IPR029020 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00098 162 461 Inorganic Solute Cotransporters AT2G38290 35.032 5.38e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00098 K03320 - acb:A1S_0219 614.379