Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00076 ATGGCCTATATTACGTTAAGGGATGTCCAACTTGCATTTGGCGGACCGTCCCTGCTCGACGGCGCGAACTTTAATTTGGAACGCGGTGAACGAGTTTGTTTGATTGGCCGTAACGGTGAAGGTAAGTCTACTTTACTTAAACTCATTGAGGGAAGTTTACTACCAGATCGTGGTGAAGTTTCTATACAAAATGGCATCACCATTTCCATGTTGGCACAAGATGTACCGATGGACTCAGGTAAAGTTGCAGATATCGTAGCCGACGGTGCAGGTGAAGCCGCAACCGTACTTCGAGCATATCACGAAGCTAGCGATGCTTGTGTATTGGGGGATATGGATGCCTGTGACCGCATGGGTGAACTTCAACACAAACTCGATTTGGTTGATGGTTGGGCTTTAGAAACTAAAGTTAACTCTATTTTAAGCAAGATGGGACTTGACCCAGATGCAGATTTAGCCGATTTATCGGGTGGTCGTAAGCGTCGTGTTCTGTTGGCTCGCGCGTTGTTGACCCAACCCGATGTGTTATTACTCGACGAACCGACGAACCATTTGGACGTTGAAAGTATTGAATGGTTAGAAAAGTTCTTGTTAGATCAGAACAATTTAACCCTATTATTTATTTCACATGACCGTTCATTTGTAGATAGCATTGCAACGCGTATTGTTGAATTGGATCGCGGTACTTTACGCAGCTATGAAGGTAACTATTCACGTTATCTCGAGCTTAAAGCACAGCAAATGGAAGCTGAAGAAAAGCAAAATGCGTTGTTCGATAAACGCTTAGCTGAAGAAGAAGTTTGGATTCGTCAAGGCATTAAAGCGCGTCGTACCCGTAACGAAGGTCGTGTTCGTGCGCTGAAAGATTTACGTGAAGAATCGAAAGCACGTCGTTCACAACAAGGTAAAGTGAGCATGGCAACGCAAGATGCCAATCGTTCAGGTAAATTGGTCTTCGATATTGAAAATCTGAGTGTTGCTTTTGGCGACCAAGAACCGATTATCAAAGATTTTTCTGCCTTGGTACTTCGTGGCGACCGTATTGGCTTAGTCGGCGACAATGGTGTGGGTAAAACTACGCTCATCAAAGCCATTCTGGGTGAACTTGAACATACGGGTTCGGTAAAAACAGGTACGCAGCTTGAAGTGGCTTATTTCGACCAATTGCGTAATGCCCTTGATCTTGAAAAATCAGTGAAAGATAACATTTCAGAAGGTTCAGATTTTGTCGATGTGAATGGCGGTCGTCGTCATATTTACAGTTATCTTCAAGATTTCTTGTTCTCACCTGAACGTGCGCGTACACCTGTAAAAGCATTGTCTGGTGGCGAACGTAACCGTATTCTTTTGGCGAAATTGTTACTTAAACCATCGAATTTAATTGTTATGGACGAACCAACCAATGACTTGGATATGGTGACTTTAGAGCTTTTAGAAGAAATGCTCGGTGGTTATAAAGGTACATTGCTCCTCATCTCGCATGACCGTGCGTTTATGGACAATGTGGTGACATCAACTTGGGTATTTGACGGTAAAGGTCATATTGATGAGTATATCGGTGGTTATCAGGACTATTTAGAACAACGTCCTGATCAAACTGCGGTAGATCAAAAAAGTGATGTCAAAAAAGCCATGGCGAAAGCTGAAGCCGCAGCGGCAGCAGCAACACCGAAAAAAGTTAAACTTAGTTATAAAGATCAACGTGCATTAGAGCAATTGCCTGCTGAAATTGAAGCTTTAGAAACAGAACAAAGCAGCTTGAATGAAAAACTTGCTGATGGTTCATTGTTTGTTAAAGATGCCAAGGCAGCAGAGAAAATTTCAGCGCGATTAGCTGAAATTGATGAACAATTACTTGAAAAAATGGAACGTTGGGATGAATTAGAAAATATGTCGAAAGGCAATTAA 1908 0.4251 MAYITLRDVQLAFGGPSLLDGANFNLERGERVCLIGRNGEGKSTLLKLIEGSLLPDRGEVSIQNGITISMLAQDVPMDSGKVADIVADGAGEAATVLRAYHEASDACVLGDMDACDRMGELQHKLDLVDGWALETKVNSILSKMGLDPDADLADLSGGRKRRVLLARALLTQPDVLLLDEPTNHLDVESIEWLEKFLLDQNNLTLLFISHDRSFVDSIATRIVELDRGTLRSYEGNYSRYLELKAQQMEAEEKQNALFDKRLAEEEVWIRQGIKARRTRNEGRVRALKDLREESKARRSQQGKVSMATQDANRSGKLVFDIENLSVAFGDQEPIIKDFSALVLRGDRIGLVGDNGVGKTTLIKAILGELEHTGSVKTGTQLEVAYFDQLRNALDLEKSVKDNISEGSDFVDVNGGRRHIYSYLQDFLFSPERARTPVKALSGGERNRILLAKLLLKPSNLIVMDEPTNDLDMVTLELLEEMLGGYKGTLLLISHDRAFMDNVVTSTWVFDGKGHIDEYIGGYQDYLEQRPDQTAVDQKSDVKKAMAKAEAAAAAATPKKVKLSYKDQRALEQLPAEIEALETEQSSLNEKLADGSLFVKDAKAAEKISARLAEIDEQLLEKMERWDELENMSKGN 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00076 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 309 502 IPR027417 -
Pumo147g00076 635 CDD ABCF_EF-3 321 513 - -
Pumo147g00076 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 319 538 IPR003439 GO:0005524
Pumo147g00076 635 SMART AAA_5 344 514 IPR003593 GO:0016887
Pumo147g00076 635 SMART AAA_5 28 229 IPR003593 GO:0016887
Pumo147g00076 635 Coils Coil 604 624 - -
Pumo147g00076 635 CDD ABCF_EF-3 4 229 - -
Pumo147g00076 635 Gene3D - 552 634 IPR037118 -
Pumo147g00076 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 4 252 IPR003439 GO:0005524
Pumo147g00076 635 Pfam ABC transporter 19 183 IPR003439 GO:0005524
Pumo147g00076 635 ProSitePatterns ABC transporters family signature. 440 454 IPR017871 GO:0005524|GO:0016887
Pumo147g00076 635 FunFam ABC transporter ATP-binding protein 280 552 - -
Pumo147g00076 635 Pfam ABC transporter 336 468 IPR003439 GO:0005524
Pumo147g00076 635 Gene3D - 4 278 IPR027417 -
Pumo147g00076 635 Coils Coil 570 590 - -
Pumo147g00076 635 FunFam Putative ABC transporter ATP-binding component 5 278 - -
Pumo147g00076 635 Gene3D - 280 551 IPR027417 -
Pumo147g00076 635 Pfam ABC transporter 223 298 IPR032781 -
Pumo147g00076 635 Pfam ABC transporter C-terminal domain 561 629 IPR032524 GO:0003677
Pumo147g00076 635 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 1 631 - -
Pumo147g00076 635 Hamap ATP-binding protein Uup [uup]. 1 630 IPR043686 GO:0003677|GO:0006281|GO:0016887
Pumo147g00076 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 241 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00076 334 494 Calmodulin-binding Proteins AT2G36910 29.121 4.63e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00076 K15738 - acb:A1S_0433 1033.09