Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00074 ATGAAAATTTTAGTTCGTAATTTAGAACGTACAGTAACAGAAGCTGAATTACTGAAGCTATTTCAAGAATTTGGTACTGTGAATACTTGTACTTTGGTTTTAGACGCTACAACAGGTAAATCGAAAGGTTTTGCCTTTGTTGATATGCCGCATGGTCGTGAAGCAGTACGAGCAATTAAAGGCTTAAATACGCTTCGTTTGCACGGACATGGTATTCGTGTCAAACAAGCTGACAATAAGCCTGAAGGTAAGGTTGAAGATAAGTCCGAAAAGAAATCAGAAAAGAAATAA 291 0.3677 MKILVRNLERTVTEAELLKLFQEFGTVNTCTLVLDATTGKSKGFAFVDMPHGREAVRAIKGLNTLRLHGHGIRVKQADNKPEGKVEDKSEKKSEKK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00074 96 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 IPR000504 GO:0003723
Pumo147g00074 96 Gene3D - 1 96 IPR012677 -
Pumo147g00074 96 MobiDBLite consensus disorder prediction 71 96 - -
Pumo147g00074 96 CDD RRM_SF 3 75 - -
Pumo147g00074 96 SMART rrm1_1 2 75 IPR000504 GO:0003723
Pumo147g00074 96 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 79 IPR000504 GO:0003723
Pumo147g00074 96 MobiDBLite consensus disorder prediction 70 96 - -
Pumo147g00074 96 PANTHER OS02G0815200 PROTEIN 2 83 - -
Pumo147g00074 96 SUPERFAMILY RNA-binding domain, RBD 2 83 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00074 3 96 Eukaryotic Initiation Factors Gene Family AT1G49760 36.458 5.65e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00074 - - att:AMQ28_05965 152.525