Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo147g00015 ATGGAGTTCCCAATGAGCAATATTCGTCCATTACATGATCGCGTAGTTATTCGTCGTGTTGAAGAAGAAACTAAAACTGCTGGTGGTATTTTACTTCCAGGTTCTGCTGCTGAAAAACCTGCTCAAGGTGAAATCATTGCAGTGGGTAATGGTCAAATTACGGACAATGGTGTACGTGCGTTAGACGTTAAAGTCGGCGACAAAGTATTGTTCGGTACTTATGCTGGTACAACTGTAAAAGTGCAAGGCGAAGAACTTCTTATTATGAAAGAGTCTGATATTTTAGCTGTTTTAGAAGGCTAA 303 0.4026 MEFPMSNIRPLHDRVVIRRVEEETKTAGGILLPGSAAEKPAQGEIIAVGNGQITDNGVRALDVKVGDKVLFGTYAGTTVKVQGEELLIMKESDILAVLEG 100
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo147g00015 100 Hamap Co-chaperonin GroES [groES]. 7 99 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 FunFam 10 kDa chaperonin 5 100 - -
Pumo147g00015 100 SUPERFAMILY GroES-like 6 99 IPR011032 -
Pumo147g00015 100 SMART Cpn10_2 7 98 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 CDD cpn10 7 98 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 PANTHER 10 KDA HEAT SHOCK PROTEIN 5 97 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 Gene3D GroES chaperonin 4 100 IPR037124 GO:0006457
Pumo147g00015 100 PRINTS 10kDa chaperonin signature 85 98 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 PRINTS 10kDa chaperonin signature 8 23 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 PRINTS 10kDa chaperonin signature 30 51 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 PRINTS 10kDa chaperonin signature 64 76 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 Pfam Chaperonin 10 Kd subunit 7 97 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo147g00015 100 ProSitePatterns Chaperonins cpn10 signature. 8 32 IPR018369 GO:0005524|GO:0006457
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo147g00015 6 99 Calmodulin-binding Proteins AT5G20720 42.553 1.29e-19 78.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo147g00015 K04078 - acb:A1S_2665 183.341