Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo144g00020 ATGCGACTCGGTGACAATGGACTAACCGGAACTATTCCCGCGTCTCTCGAGAATCTGGTCAACCTGGTCAACCTCGGCTTGGCTTCCTGTGGACTCACCGGGTCGATCCCGAGTCAACTCGGTCAACTCAGTCTCATGGAGAATCTGATTCTGCAGGACAACGAGTTGATGGGTCCGATTCCGACCGAGTTGGGGAACTGCTCAAGCCTCACCATCTTCACTGCAGCTAACAACAAACTCAATGGCTCAATCCCGAGTGAACTGGGTCGACTTAGGAATCTGCAGATTCTCAACTTAGCCAACAACAGCTTATCAGGGGAGGTTCCGAGTCAACTCGGTGACATGAGTCAACTCGTTTACATGAACTTCATGGGGAACCAGCTCGAGGGTGCTATTCCACCGTCTCTAGCTCAACTGGGCAATCTTCAAAATCTGGACTTGTCAATGAACAAGCTCGGTGGAGGAATCCCAGAGGAGTTAGGCAACATGGGTGAGTTAGCTTACTTGGTTCTGTCTGGTAACAACCTTAATTGTATACCAAGAACCATATGTTCCAATGCAACAAGTTTGGAGCACTTGATGTTGTCAGAAAGTGGACTTCATGGTGAGATTCCAGCTGAGTTGAGTCAGTGCAAGCAATTGAAGCAACTTGATTTGTCCAACAATGCACTCAATGGGTCCATACCTCTTGAGCTTTATGGGTTGCTGGGGTTAACTGATCTCTTGCTGAACAATAACAGTTTGGTTGGTTCCATCTCTCCTTTCATTGGGAAACTCAGTGGCTTGCAGACACTTGCTTTGTTTCACAACAATTTGCAAGGTGCTCTGCCAAGAGAGATTGGAATGCTTGGCAAGTTGGAAATTTTGTATCTTTATGATAATCAATTGTCAGGGGCTATTCCTATGGAGATTGGTAATTGTTCTAGCTTGCAAATGGTTGATTTCTTTGGGAACCATTTCAGTGGGGAAATTCCCATCACTATTGGAAGGCTGAAAGAGTTGAATTTTCTTCACCTTAGACAGAATGAGCTTGTGGGTGAGATTCCAGCCACCTTGGGTAATTGTCACAAACTCAACATTCTGGATTTGGCTGACAATCAGCTCTCAGGTGCAATTCCTGCAACCTTTGGATTCCTCGAGGCATTGCAACAGTTCATGCTCTACAACAATTCTCTTGAAGGTAACCTCCCTAACCAACTGATAAATGTAGCAAACTTGACCAGAGTGAATCTTTCAAAGAACAGATTGAATGGTAGTATTGCTGCATTGTGTAGCTCTCGATCATTTCTTTCTTTCGATGTAACCGACAATGAGTTTGATGGTGAGATTCCTTCCCAAATGGGCAACTCACCCTCCCTTGAGAGGCTAAGATTGGGTAACAACAAATTCTCTGGTGAAATTCCAAGGACATTGGGAAAAATCCGTGAGTTGTCATTGATAGACCTCTCAGGAAATTCACTCACTGGACCAATACCAGCTGAGCTTTCTTTGTGCAACAAACTGACTTATATTGATTTAAACAGTAATTTTCTTTTTGGACAAATATCATCATGGCTTGAAAATTTGCCTCAGTTGGGAGAGCTTAAGCTCTCCTCCAATAACTTTTCTGGGCCTCTTCCATTAGGCCTATTCAAATGTTCCAAATTGCTAGTTCTCTCTCTAAATGACAACTCTCTGAATGGAAGTCTTCCATCTGATATCGGTGATCTTGCATACCTTAATGTCCTCAGACTTGACCACAACAAGTTCTCTGGACCAATCCCTCCGGAGATAGGTAAGTTGACCAAGCTGTATGAGCTCCGGCTCTCTAGAAATAGCTTCAGTGGTGAGATGCCAGCTGAGATTGGAAAACTTCAAAATCTCCAAATCATTTTAGACCTCAGTTACAATAATCTCTCAGGTCAAATCCCACCTTCTGTTGGGACACTGTCAAAGTTAGAAGCACTTGATCTTTCACACAATCAACTCAATGGAGAAGTCCCTCCACATGTTGGGGAAATGAGCAGTTTGGGAAAGCTTAATCTCTCTTACAACAACCTTCAAGGAAAATTGGATAAGGAGTTCTCCCGCTGGCCAGACGAGGCATTTGAAGGAAACCTACATCTTTGTGGAAGCCCTCTTGAGCGTTGCCACCGTGATGACGCTTCTGGGAGCGCAGGCCTAAATGAGTCATCAGTAGTGATAATATCTTCCATTTCAACTTTAGCTGCAGTTGCACTTTTGATACTTGCAGTGAGAATCTTCTCCAAAAACAAGCAAGAATTTTGCAGGAAAGGCAGTGAAGTGAATTATGTTTACTCTTCCTCTTCATCACAAGCACAGAGAAGACCGATGTTCCAACTAAATGCTGCTGGAAAGAGAGATTTCAGATGGGAAGACATCGTGGATGCCACGAACAACCTAAGTGATGACTTCATGATTGGTTCAGGAGGTTCAGGGAAAATCTACAAAGCTGAATTGGCCACTGGAGAGACAGTGGCTGTCAAGAAGATTTCATCAAAAGATGAATTTCTGTTAAACAAAAGCTTCATAAGAGAAGTCAAGACACTAGGGAGGATTAGGCATAGACATCTGGTGAAGCTAATAGGATATTGTACCAATAGAAACAAAGAAGCAGGTTGGAATCTGTTGATATATGAGTACATGGAGAATGGTAGTGTATGGGATTGGCTTCATGGGAAACCAGCCAAGGCAAGCAAAGTAAAGAGGAACCTTGATTGGGAGACAAGGTTCAAAATTGCTGTGGGATTAGCTCAAGGAGTGGAGTACCTCCATCACGATTGTGTCCCAAGGATCATTCACAGGGACATCAAATCCAGCAACGTATTGCTAGATTCCAAAATGGAGGCGCACTTGGGAGATTTTGGACTGGCAAAAGCACTAACTGAGAATTGTGACTCCAATACTGAGTCTAATTCTTGGTTTGCTGGCTCTTATGGCTACATAGCTCCAGCTGAGATGGACATGGTGAGATGGGTAGAGATGCACATGGATATGCATGGCTCTGCACGTGAGGAATTGATTGATCCTGAGCTGAAACCTCTTTTACCTGGCGAAGAGTTTGCTGCATTCAAAGTGCTTGAGATAGCCTTACAGTGCACGAAAACTACACCACAGGAAAGGCCATCTTCAAGGAAAGCATGCGATCTTCTCCTCCATGTATTCAACAACAGGACTGGTGAAGTTTGA 3189 0.4393 MRLGDNGLTGTIPASLENLVNLVNLGLASCGLTGSIPSQLGQLSLMENLILQDNELMGPIPTELGNCSSLTIFTAANNKLNGSIPSELGRLRNLQILNLANNSLSGEVPSQLGDMSQLVYMNFMGNQLEGAIPPSLAQLGNLQNLDLSMNKLGGGIPEELGNMGELAYLVLSGNNLNCIPRTICSNATSLEHLMLSESGLHGEIPAELSQCKQLKQLDLSNNALNGSIPLELYGLLGLTDLLLNNNSLVGSISPFIGKLSGLQTLALFHNNLQGALPREIGMLGKLEILYLYDNQLSGAIPMEIGNCSSLQMVDFFGNHFSGEIPITIGRLKELNFLHLRQNELVGEIPATLGNCHKLNILDLADNQLSGAIPATFGFLEALQQFMLYNNSLEGNLPNQLINVANLTRVNLSKNRLNGSIAALCSSRSFLSFDVTDNEFDGEIPSQMGNSPSLERLRLGNNKFSGEIPRTLGKIRELSLIDLSGNSLTGPIPAELSLCNKLTYIDLNSNFLFGQISSWLENLPQLGELKLSSNNFSGPLPLGLFKCSKLLVLSLNDNSLNGSLPSDIGDLAYLNVLRLDHNKFSGPIPPEIGKLTKLYELRLSRNSFSGEMPAEIGKLQNLQIILDLSYNNLSGQIPPSVGTLSKLEALDLSHNQLNGEVPPHVGEMSSLGKLNLSYNNLQGKLDKEFSRWPDEAFEGNLHLCGSPLERCHRDDASGSAGLNESSVVIISSISTLAAVALLILAVRIFSKNKQEFCRKGSEVNYVYSSSSSQAQRRPMFQLNAAGKRDFRWEDIVDATNNLSDDFMIGSGGSGKIYKAELATGETVAVKKISSKDEFLLNKSFIREVKTLGRIRHRHLVKLIGYCTNRNKEAGWNLLIYEYMENGSVWDWLHGKPAKASKVKRNLDWETRFKIAVGLAQGVEYLHHDCVPRIIHRDIKSSNVLLDSKMEAHLGDFGLAKALTENCDSNTESNSWFAGSYGYIAPAEMDMVRWVEMHMDMHGSAREELIDPELKPLLPGEEFAAFKVLEIALQCTKTTPQERPSSRKACDLLLHVFNNRTGEV 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo144g00020 1062 Gene3D Ribonuclease Inhibitor 1 231 IPR032675 -
Pumo144g00020 1062 Gene3D Phosphorylase Kinase; domain 1 761 881 - -
Pumo144g00020 1062 Gene3D Ribonuclease Inhibitor 232 325 IPR032675 -
Pumo144g00020 1062 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Pumo144g00020 1062 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 325 421 - -
Pumo144g00020 1062 SMART LRR_typ_2 667 698 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 283 307 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 163 186 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 331 355 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 139 162 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 643 665 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 594 618 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 522 546 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 211 235 IPR003591 -
Pumo144g00020 1062 SMART LRR_typ_2 91 115 IPR003591 -
Pumo144g00020 1062 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 762 881 - -
Pumo144g00020 1062 ProSitePatterns Serine/Threonine protein kinases active-site signature. 932 944 IPR008271 GO:0004672|GO:0006468
Pumo144g00020 1062 ProSiteProfiles Protein kinase domain profile. 801 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo144g00020 1062 Gene3D Ribonuclease Inhibitor 326 425 IPR032675 -
Pumo144g00020 1062 Gene3D Ribonuclease Inhibitor 426 718 IPR032675 -
Pumo144g00020 1062 SMART serkin_6 801 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo144g00020 1062 SUPERFAMILY L domain-like 204 556 - -
Pumo144g00020 1062 PANTHER UNNAMED PRODUCT 381 998 - -
Pumo144g00020 1062 FunFam Os07g0541700 protein 897 977 - -
Pumo144g00020 1062 Pfam Leucine Rich Repeat 500 522 IPR001611 GO:0005515
Pumo144g00020 1062 SUPERFAMILY Protein kinase-like (PK-like) 784 1051 IPR011009 -
Pumo144g00020 1062 SUPERFAMILY L domain-like 499 692 - -
Pumo144g00020 1062 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 45 116 - -
Pumo144g00020 1062 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Pumo144g00020 1062 Gene3D Transferase(Phosphotransferase) domain 1 882 989 - -
Pumo144g00020 1062 PRINTS Leucine-rich repeat signature 643 656 - -
Pumo144g00020 1062 PRINTS Leucine-rich repeat signature 214 227 - -
Pumo144g00020 1062 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Pumo144g00020 1062 Pfam Leucine rich repeat 596 656 IPR001611 GO:0005515
Pumo144g00020 1062 SUPERFAMILY RNI-like 2 321 - -
Pumo144g00020 1062 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 132 230 - -
Pumo144g00020 1062 Pfam Protein kinase domain 806 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo144g00020 1062 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 422 714 - -
Pumo144g00020 1062 FunFam Uncharacterized protein 231 324 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo144g00020 1 547 Receptor kinase-like Gene Family AT1G17750 34.673 9.96e-79 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo144g00020 Pkinase 2.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo144g00020 - - gmx:100801889 1898.63