Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo144g00004 ATGGTTTTTCCAAGACCTCCTTCCGAGTCTGACCTCTTTCTTCATTCCAACTTTGCTTCTCGCTATGCCAGGGACTCTCTTCCCAGGTTCTGCATGCCCGAGGACTCCATGCCTAAGGAGGCTGCGTACCAGAACATTCACGATGAGTTGCAGCTTGATGCTATTCCAAAGCTTAACTTGGCTTCCTTTGTGACCACTTCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAGAACTATGTCGACATGGACGAGTATCCTATCACCACTGACCTTCACAATCGGTGCGTGAACATGATGGCACGTTTATTCCATGCTGAAATTGGAGAAAATGAGAATGCAATTGGAGCAGGAACTGTTGGATCATCAGAGGCTATAATGCTGGCAGGGCTTGCATTCAAGAAAAAGTGGCAGAACAAGCGCAAGGCAGAGGGCAAGCCTTATGATAAGCCCAACTTGGTGACTGGTTCCAGTGTGCAGGTATGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTAAGGGAAATTGAAGTGAGAGAAGGCTACTATGTGATGGACCCTGCCAAAGCCGTTGAGATGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTCGAAGATGTCAAGCTCTTAAATGACCTGCTGCTAGAAAAAAACAAGCAAACTGGATGGGATACTCCTATTCATGTGGATGCAGCTAGTGGTGGGTTTATTGCTCCTTTCCTTTACCCAGAGCTAGAATGGGATTTCAGACTCCCATTGGTGAAGAGCATTAATGTTAGTGGCCACAAGTATGGCCTTGTTTATGCTGGTATTGGTTGGGTTATATGGAGGACCAAGGACGACTTGCCAGAAGACCTTGTCTTCCATATTAATTACCTTGGAGCTGACCAGCCCACCTTCACTCTCAATTTCTCTAAAGGTTCTAGTCAGATAATTGCTCAATATTATCAGCTAATTCGACTTGGCCAAGAGGGGTACCGAAGCATAATGGAGAACTGCAGAGACAATGCAATGGTGCTGAAGGAAGATTTGGAGAAGAGTGGACGCTTTAACATACTCTCAAAAGACAATGGTGTTCCTGTGGTGGCATTTTCTCTGAAAGACAGAAGCCAGTACGATGAGTTCAAGATATCAGAGATGTTGCGCCGCCACGGTTGGATCGTGCCTGCATATCCAATGCCACCTGGTGCTCAACACATCAATGTGCTCCGTGTGGTCATCAGGGCTGAGTTTTCACGCACTCTTGCTGAACGCCTTGTGCTTGACATACACAGTGTGCTGGATGAACTTGAAAAGATGCATCCCCCTATAGTGGCCATAAACACCAAGGAAGAGAACAAGGCCTTGGTTGATACTGGGGTGAAGAACACTCACACTGCTGCATTGGATTCACGCAGGGAAATCACTGCTCAAGAATCCAATAAGCGTCAAAAAATCATGGTTGCCTAG 1491 0.4608 MVFPRPPSESDLFLHSNFASRYARDSLPRFCMPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMMARLFHAEIGENENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSSVQVCWEKFARYFEVELREIEVREGYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRDNAMVLKEDLEKSGRFNILSKDNGVPVVAFSLKDRSQYDEFKISEMLRRHGWIVPAYPMPPGAQHINVLRVVIRAEFSRTLAERLVLDIHSVLDELEKMHPPIVAINTKEENKALVDTGVKNTHTAALDSRREITAQESNKRQKIMVA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo144g00004 496 CDD DOPA_deC_like 59 437 - -
Pumo144g00004 496 Gene3D - 1 65 - -
Pumo144g00004 496 FunFam Glutamate decarboxylase 66 360 - -
Pumo144g00004 496 Gene3D - 66 360 IPR015421 GO:0003824
Pumo144g00004 496 FunFam Glutamate decarboxylase 5 65 - -
Pumo144g00004 496 Gene3D - 361 448 - -
Pumo144g00004 496 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pumo144g00004 496 PANTHER GLUTAMATE DECARBOXYLASE 10 489 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pumo144g00004 496 FunFam Glutamate decarboxylase 361 448 - -
Pumo144g00004 496 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pumo144g00004 496 SUPERFAMILY PLP-dependent transferases 16 447 IPR015424 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo144g00004 1 482 Calmodulin-binding Proteins AT5G17330 74.587 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo144g00004 K01580 - gmx:100781791 926.391