Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo144g00001 ATGACCACGTATAAATACCACTATTTGCCTCTTCAACACCCTTCATCCAACATCCAAACAAAGCTCAAAACAAACACCAGTCTTTCTTTGCTGTCTCTAAGATCAGCAACGTATCATAACACACACTTCACCATGGTTTTTCCAAAACCCGCTTCTGAGTCTGATCTCTTTCTTCGGTCCAACTTTGCTTCTCGTTATGCCAGGGACTCTCTTCCCAGGTTCAGCATGCCCGAGGACTCCATGCCTAAGGAGGCTGCATACCAGAATATACACGATGAGTTGCAGCTTGATGCAATTCCAAAGCTCAACTTGGCTTCCTTTGTGACCACTTCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCTATTAACAAGAACTATGTTGACATGGACGAGTATCCTGCCACCACTGACCTTCACAATCGGTGCGTGAACATGATAGCACGTTTGTTCCATGCTGAAATTGGAGAAAATGAGAATGCAATTGGAGCAGGAACTGTTGGATCATCAGAGGCTATAATGCTGGCAGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGCAAGGCAGAGGGCAAGCCTTATGATAAGCCCAACTTGGTGACTGGTTCCAATGTGCAGGTATGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTAAGGGAAGTGGAGGTGAGGGAAGGATACTATGTGATGGATCCTGCCAAAGCCGTTGAACTGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTCGAAGATGTCAAGCTCTTAAATGACTTGTTGCTAGAAAAAAACAAGCAAACTGGATGGGATACACCTATTCATGTTGATGCTGCTAGTGGTGGGTTTATTGCTCCTTTTCTTTATCCAGAGCTAGAATGGGATTTCAGACTCCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGACTTGTTTATGCTGGTATTGGTTGGGTTATATGGAGAACCAAGGAAGACTTGCCAGAAGACCTTGTCTTCCATATCAATTACCTTGGAGCTGACCAACCCACCTTCACCCTCAATTTTTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGCTAATTCGCCTTGGCCAAGAGGGATACCGAAGCATAATGGAGAACTGCAGAGACAATGCTATGGTGCTGAAGGAAAATTTGGAGAGGAGTGGACGCTTTAACATACTCTCAAAAGACAATGGTGTTCCTGTGGTGGCATTTTCTCTCAAGGACAGAAGCCAGTACGATGAGTTCAAGATATCAGAGATGTTGCGCCGCCACGGTTGGATTGTGCCAGCTTATCCAATGCCACCTGGTGCTCAACACATCAAAGTGCTCCGTGTGGTGATCAGGGCTGAGTTTTCACGCACCCTTGCTGAACGCCTTGTGTTTGACATATACAATGTGCTGCATGAACTCGAAAAACTACACCCCCCCAAAGTGACCAACAACATTAAGGAAGAGAACAGTGCCTTGGTTGCAACTGGTGTCAAGAAAACTGCATTGGATGCACACAGGGAAATCATTGATCAAGAATCAAACAAGCGTCAGAAAATCATGGCTGCCTAG 1614 0.4486 MTTYKYHYLPLQHPSSNIQTKLKTNTSLSLLSLRSATYHNTHFTMVFPKPASESDLFLRSNFASRYARDSLPRFSMPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARLFHAEIGENENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRDNAMVLKENLERSGRFNILSKDNGVPVVAFSLKDRSQYDEFKISEMLRRHGWIVPAYPMPPGAQHIKVLRVVIRAEFSRTLAERLVFDIYNVLHELEKLHPPKVTNNIKEENSALVATGVKKTALDAHREIIDQESNKRQKIMAA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo144g00001 537 Gene3D - 110 404 IPR015421 GO:0003824
Pumo144g00001 537 CDD DOPA_deC_like 103 481 - -
Pumo144g00001 537 Pfam Pyridoxal-dependent decarboxylase conserved domain 77 425 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pumo144g00001 537 NCBIfam glutamate decarboxylase 60 488 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pumo144g00001 537 Gene3D - 405 491 - -
Pumo144g00001 537 FunFam Glutamate decarboxylase 48 109 - -
Pumo144g00001 537 SUPERFAMILY PLP-dependent transferases 60 490 IPR015424 -
Pumo144g00001 537 PANTHER GLUTAMATE DECARBOXYLASE 47 531 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pumo144g00001 537 Gene3D - 45 109 - -
Pumo144g00001 537 FunFam Glutamate decarboxylase 405 492 - -
Pumo144g00001 537 FunFam Glutamate decarboxylase 110 404 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo144g00001 45 524 Calmodulin-binding Proteins AT5G17330 76.337 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo144g00001 K01580 - gmx:100782330 941.414