Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo143g00015 ATGGATACCTATGGTAATACATGTGAGATAGTGGAGTCAAGGGAAGAGATAATTTCTGAGTTCAAAATGGATGAAAAGCCTGAGAGTAGTTGTGCTCACAAATCAGGAAAAAAGTATTCGATTGAGGATGATATTAATCAGCTTTTCCAGGCTATTGACATTAAAAGTTCATCTAGAAGTCGTTGTTCATCACGTTCACAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTCACTTCATCTCAGGCATCAGGAATTGGCATCTCAGAGTCTGTAAGTTTAAAGCAGGCACTTAGAGGGTTGTGCATCTCTCAGGCCTCGGAAATGGCTGCTTTGAAGAGACTAACTAAGCCATGCAGTTCATCTAGAGTATCAGAGGCTGGCACCATCAAAAGGTTGTACACAGCGGTGGTAGATGAGGGGAAAGGGAACTTGGTTGAAATTTCTCTAGTGCCAGAGATATCTGCACCTTCTGATAAATTGCCCGGTGTAACTATATCAAGTTCAAGTGATCATCATTCTAGTCCTTTGGTTGATCCAACAAAACCGAAAGAAATGATAACTGGGTTTTCATCCCAAGATCAGATTGTTCCTCTACCATTAGAGGGTGCTGATGAGAAACCAATCATGGAGATTGGAAAACGAATACTTGCAAATTTGTCACCAGTTGCCTCTGCAAGTGAAGTGCCAGAGGTCAGAAGGGATCCTGCTTCCTCAAGCAAAGCTTCTCTTGGTTCTTCAATGCCAGAGAAGGGGCAGGAAGCAAATTTACCTTCTGCATCTTGTCCACCTAGCTCTAGCACCGGTAATGGAGTGGATAAATCCCCAAGCAGTAATGCTTGTTTGTCAAAGCCGATATTCAATAACTTGAACTTCCTTAAGAAAAAAGTAAAGCAAGATTTAAGTTCTGCCTCAAGCTGCTCTACTCCATGTACAAGGAATTTGGACAAGGAGGTTGGCAATTCTGATTTGAAGCATGAAGTGAAAGTAATTGAGAAACTGTCTCCTAGCAGTTCAAATCATAGCATTGAAGTTAACTCAGTTAATGTTGGTACGGATTCAAGCAAATCTGGTTTCAGCTTGAATTGCAATAAGAGAACTAAGTTTCTGGTGACAAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGTGAGTACTCTCAAAGCTCGAAAAGTAGCATTGGTGAATATAGTAGTAGCACAAGCATCAGTGAGGAAAGCAGTCTAAGTAGTTCCAGTCGCGGTGGCCACAGGCCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCAGCAGCAACATGGTAATTTAAATTTGAAGCACTTTAAGCTGCTAAGGAGGCTTGGTAGTGGGGACATTGGAACTGTTTATCTTGCGGAACTAATTGGTACAAGCTGCCTTTTTGCACTCAAAGTGATGGACAATGAATTTTTGGCAAGTCGGAAGAAAATGTTCAGGGCCCAAACTGAAAGAGAGATCCTTCAGATGCTGGACCATCCATTTCTTCCTACGCTGTATTCCCATATTGCAACAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGCGGAGATCTGCATGTGCTGCGACAGAGGCAACCATACAAGAGTTTCTCGGAACAAGCAACTAGGTTTTATGTTGCTGAGGTTCTTCTTGCCCTGGAGTATTTGCACATGCTAGGAGTTGTATATCGAGACCTAAAGCCAGAAAATATCCTAGTACGAGAAGATGGACACATTATGCTGACAGATTTTGATTTGTCACTCAGGTGTTCTGTCAATCCAATGTTAGTCAAGTCCTCTTCACCTGACACAGATGCCACAAAGAAGACGTCCAGTCCCTGTTCTGAGGCTAGTTGCATACACCCTTTCTGTCTCCAACCAGATTGGCAAGTTTCCTGCTTTACTCCCATTCTATTATCTGCCGGAGCAAAATCTCGAAAGATGAAGGCTGACATAGCTTCTCAGGTTGGTCCTCTGCCACAGCTTGTAGTGGAGCCTACCAGTGCACGGTCTAACTCCTTTGTTGGAACCTATGAATATCTTGCTCCAGAGATCATCAAAGGTGAAGGTCATGGGAGTGCTGTAGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTATATGGCAAGACTCCCTTCAAGGGCCAATCAAATGAGGACACATTAGCCAATGTTGTGTCACAAAGCCTTAAGTTCCCGGGTGCTCCAATAGTCAGTTTTCATGCAAGAGATTTGATCAGAGGATTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCTGTAAAAGGTGCTGCTGAAATAAAGCAGCACCCTTTCTTTGAAGGCCTCAACTGGGCTCTAATACGGTGCGCAGCACCACCAGAGCTCCCCAAGTTTCGGGATTTTGGAAGTAGTGCTCCATCTGTGGCTGCAAATAAGGAGAATGCAAATGATTTAGAGGATATAGAAGATTGTGAAGAGTTTGAGCTGTTTTAG 2490 0.4273 MDTYGNTCEIVESREEIISEFKMDEKPESSCAHKSGKKYSIEDDINQLFQAIDIKSSSRSRCSSRSQKSALKRPIKVTSSQASGIGISESVSLKQALRGLCISQASEMAALKRLTKPCSSSRVSEAGTIKRLYTAVVDEGKGNLVEISLVPEISAPSDKLPGVTISSSSDHHSSPLVDPTKPKEMITGFSSQDQIVPLPLEGADEKPIMEIGKRILANLSPVASASEVPEVRRDPASSSKASLGSSMPEKGQEANLPSASCPPSSSTGNGVDKSPSSNACLSKPIFNNLNFLKKKVKQDLSSASSCSTPCTRNLDKEVGNSDLKHEVKVIEKLSPSSSNHSIEVNSVNVGTDSSKSGFSLNCNKRTKFLVTKVDEKSRSKEKGEYSQSSKSSIGEYSSSTSISEESSLSSSSRGGHRPHMSKHLRWEAVRAVQQQHGNLNLKHFKLLRRLGSGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKMFRAQTEREILQMLDHPFLPTLYSHIATDKLSCLVMEYCPGGDLHVLRQRQPYKSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPDTDATKKTSSPCSEASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKADIASQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKGQSNEDTLANVVSQSLKFPGAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSSAPSVAANKENANDLEDIEDCEEFELF 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo143g00015 829 Gene3D Transferase(Phosphotransferase) domain 1 524 593 - -
Pumo143g00015 829 FunFam serine/threonine-protein kinase D6PK-like 528 595 - -
Pumo143g00015 829 SUPERFAMILY Protein kinase-like (PK-like) 419 796 IPR011009 -
Pumo143g00015 829 MobiDBLite consensus disorder prediction 161 175 - -
Pumo143g00015 829 MobiDBLite consensus disorder prediction 332 355 - -
Pumo143g00015 829 CDD STKc_phototropin_like 442 801 - -
Pumo143g00015 829 ProSiteProfiles Protein kinase domain profile. 444 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo143g00015 829 Gene3D Phosphorylase Kinase; domain 1 442 523 - -
Pumo143g00015 829 MobiDBLite consensus disorder prediction 386 415 - -
Pumo143g00015 829 MobiDBLite consensus disorder prediction 379 421 - -
Pumo143g00015 829 Pfam Protein kinase domain 675 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo143g00015 829 Pfam Protein kinase domain 445 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo143g00015 829 FunFam serine/threonine-protein kinase D6PK-like 673 796 - -
Pumo143g00015 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Pumo143g00015 829 Gene3D Transferase(Phosphotransferase) domain 1 672 796 - -
Pumo143g00015 829 MobiDBLite consensus disorder prediction 238 276 - -
Pumo143g00015 829 SMART serkin_6 444 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo143g00015 829 PANTHER FLIPPASE KINASE 1-RELATED 314 797 - -
Pumo143g00015 829 MobiDBLite consensus disorder prediction 161 185 - -
Pumo143g00015 829 FunFam Serine/threonine-protein kinase D6PK-like 442 527 - -
Pumo143g00015 829 MobiDBLite consensus disorder prediction 223 276 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo143g00015 369 829 AGC Kinase Gene Family AT3G52890 65.890 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo143g00015 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo143g00015 - - gmx:100784955 1420.22