Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo140g00006 ATGGTTATCTCTCTGGAATCTCAAGACAGGTGGTTTGACCTCACTTACTATAAGTTGTACAAAACTAACAATTTCAAGTCATCCACAACATGCAAGTCCACACTATACCCTAAACTATGCCGCTCCATCCTCTCCTCCATCCGCGCCTCGCCTTCCGACCCCTACAAGCTGGGCAAATTCTCCATCAAACAAAGCCTCAAGCAAGCCAAGAAGCTAGCCAAAGTCTTCACCGACTTCCTCACAAAACACAAGTCTTCTTCCCTCGACACCGCCGAGATCGCTGCCCTAGAAGACTGCAGCGAGCTCAACCAGCTCAGCGTTGGCTACTTGGAGTCAGTCTCACAAGAGCTCAAGTCCGCAGACTCATCCAACACAGAATTGGTAGAGAAAATTGAGACTTATCTCAGTGCTGTAGCCACTAACCACTACACCTGCTATGATGGGTTGGTGGTGATCAAGAGCGACATTGCCAATGCTATTGCTGTGCCTCTCAAGAATGTGACTCAACTCTACAGTGTGTCACTTGGGTTGGTCACGCAGGCTCTTAAGAAAAACCTCAAGAAGCATAAGACCCGCAAACATGGTCTTCCCACCAAGGATAACAAGGTCAGGCAGCCACTCAAAAAGCTCATCAAGCTTCTTCACACAAAGTACAGTTGCACAGCATCATCCAATTGTAGTACTACTAGAAGTGAAAGGATTCTCAAAGAAAGCGAGAGCAAAGGAATTCTTCTGAAAGAGTTTGCGATTGTGAGCCTTGATGGCACAGAGAACTTCACCTCCATTGGAGAGGCTATTGCAGCTGCACCTGATAATTTAAGGCCAGAAGATGGCTATTTTCTTATCTATGCCAGAGAAGGAAACTATGAGGAATATGTCACTGTTCCCATTCAAAAGAAAAATATCTTGCTTATTGGTGATGGTATCAACAAGACTTGCATCACAGGAAACCATAGTGTTGTAGATGGTTGGACCACTTACAATTCTTCAACCTTTGGTAAGTGA 1005 0.4527 MVISLESQDRWFDLTYYKLYKTNNFKSSTTCKSTLYPKLCRSILSSIRASPSDPYKLGKFSIKQSLKQAKKLAKVFTDFLTKHKSSSLDTAEIAALEDCSELNQLSVGYLESVSQELKSADSSNTELVEKIETYLSAVATNHYTCYDGLVVIKSDIANAIAVPLKNVTQLYSVSLGLVTQALKKNLKKHKTRKHGLPTKDNKVRQPLKKLIKLLHTKYSCTASSNCSTTRSERILKESESKGILLKEFAIVSLDGTENFTSIGEAIAAAPDNLRPEDGYFLIYAREGNYEEYVTVPIQKKNILLIGDGINKTCITGNHSVVDGWTTYNSSTFGK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo140g00006 334 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 181 IPR035513 -
Pumo140g00006 334 PANTHER PECTINESTERASE 27 333 - -
Pumo140g00006 334 SUPERFAMILY Pectin lyase-like 248 332 IPR011050 -
Pumo140g00006 334 CDD PMEI-like_3 29 179 - -
Pumo140g00006 334 Pfam Plant invertase/pectin methylesterase inhibitor 29 176 IPR006501 GO:0004857
Pumo140g00006 334 NCBIfam pectinesterase inhibitor domain 28 180 IPR006501 GO:0004857
Pumo140g00006 334 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 180 IPR035513 -
Pumo140g00006 334 Gene3D - 248 334 IPR012334 -
Pumo140g00006 334 SMART PMEI_2 21 177 IPR006501 GO:0004857
Pumo140g00006 334 Pfam Pectinesterase 249 333 IPR000070 GO:0030599|GO:0042545
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo140g00006 31 332 Carbohydrate Esterase AT3G10720 53.922 4.27e-106 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo140g00006 K01051 - gmx:100808277 533.487