Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo139g00002 ATGTTGTATGTTTTCTCACTCCTTTCTCTCATGCATTCTGCCACTGCTCTTCTCCTCAAACCTATTTTCCTTCATGCCTTATCTGGCTCCCTCCACCTTCTCTTGCTCGTGGCAGTTTCGCTGTCATGGCTCTGGAACAAAATCACATTCACAGTGGAACCCAGAGAAGAAAACTCTGAGGAGAAAGAGAAACCCAATAATATCACCCTCTTCAAAACGACCGTGTTTTGTTCTCTCGCTCTTTCTGCTTTCAGCCTCGTCCTCTGTTTGTTCAATTACTTCTACTGGTACACAAGTGGCTGGTCAGAGCAAAAGCTTGTGACCCTTTTGGATTTGGCGCTCAAAACACTCGCTTGGGGCGTTGTTTCTGTTTCCCTGCACAAAGGGTTCTCATTATTCTTCTTCTTCACTTCCGGTGAAGAAACAAGGTTCAGGTTCTCGTTCTTCTTCAGAGCTTGGTGCACCTTCTACCTCATTTTTTCTTGCTATTCCTTCGTGGTGGACATTGTTGTTCTCTCCGAGGAGACACCAATTCAATACTTGGTGTTGGTTTCTGACGTTGTATCCACTTGTGCGGGGTTCTTCTTCTGTTACGTGGCGTATTTTGTGAAAAACAAGGGTCACGTTAACGGTATTGAGGAACCTCTTTTGAATGGTGAAGCAAAAGAGGCCAAGGGTGGTGACACTGTTACCCCTTTCTCACATGCTGGAGTTTTCAGCATTCTCACTTTCTCTTGGATGGGTCCTCTTGTGGCTGTTGGCAACAAGAAAACCTTGGACCTTGAGGATGTTCCTCAACTTGACACCAGAGATAGTGTGGTTAGTGCTTTTCCAACTTTCAGGGATAAACTTGAGGCTGATTGTGGTGCAAATGCAGTTAATACTGTCACCACAATTAAGCTGGTGAAGAATATTGTAATGTCAGCATGGAGGGAGGTTCTCTTCACAGCTTTTCTTGTATTGTTAAAGACCCTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAGTACCTTGATGGACAACGGCTGTATGAAAACCAGGGCTATGTGTTGGTTTTTACGTTCTTCTTTGCGAAGATTGTAGAGTGCCTCTCCCGAAGGCATTGGTTCTTTAGGTTGCAGCAAGTTGGAATTCGAATTCGGGCGGTGCTTGTAACCATGATCTATAGCAAGGCTCTCACTCTTTCTTGTCAATCAAAGCAGGGCCATACTTCTGGGGAAATGATCAATTTCATGACTGTTGATGCTGAGAGAGTCGGCGACTTCAGTTGGTACATGCATGATTTGTGGATGGTGCCTCTGCAGGTTGCGTTGGCCTTGTTGATTTTGTATAAGAACCTTGGCCTTGCTTCAATTGCTGCTCTTGTTGCAACCATTATTGTGATGTTTGCAAATGCTCCCTTGGGATCATTGCAAGAGAAGTTTCAAAGTAAGTTGATGGAGTCAAAAGATACAAGAATGAAGGCCACATCCGAGATTTTGAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCGAAAATAACCGAGCTCAGGAAAACTGAGCAAGGCTGGTTAAAGAAATATGTTTACACTAATGCCATGACCACGTTTGTGTTTTGGGGTGCCCCCACTTTTGTATCCGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATTCCCCTTGAATCTGGGAAGATCTTGTCTGCACTTGCAACATTCCGGATTCTCCAAGAGCCCATTTATAATCTTCCTGATACAATTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTGCAACATTCCTTCGGCTTGATGAGTTACGGTCTGATGTTGTAGAGAATGTTCCCCGGGGCAGTTCTGATACAGCAATTGAAGTAATTGATGGAAACTTTTCTTGGGATTTATCTTCCCCTAACCCAACATTGCAAAATATAAATCTCAAAGTCTTTCCTGGGATGAGAGTTGCTGTTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAAGTCCCAAAGATATCAGGCATCCTTAAGGTTTGCGGAACAAAGGCCTATGTTGCTCAATCTCCATGGATACAAAGCGGCAAGATAGAGGATAATATATTGTTTGGTAAACACATGGATAGGGAAAGGTATGAGAAGGTACTTGAAGCCTGTTCCCTGAAGAAGGACCTGGAGATTTTGTCATTTGGTGATCAGACAATTATAGGAGAACGGGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCACGTGCTCTTTACCAAGATGCTGATATATATCTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCACACAGGCTCTCACCTCTTTAAGGAATGCTTGCTGGGCCTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTTCTGACCTTATATTGGTCATGAAAGATGGGAGAATTACTCAACGTGGAAAGTATAATGATCTGCTTAATAGTGGTACTGATTTTATGGAACTTGTTGGCGCACACAAAAAAGCTTTGTCTACACTAGATTCATTGGATGGAGTGACAACATCTAATGAAATAAGTACCTTGGAACAAGATGCAAATGTCTCTAGCACGCATGGTTTTAAAGTAAAAGAGGCAAGCAATGATGAGCAAAATGGTAAAATAAACAACAAAAGTGAACCAAAAGGTCAGCTTGTTCAAGAAGAAGAAAGGGAGAAAGGTCAAGTTGGGTTTTCAGTCTATTGGAACTATATCACAACGGCGTATGGAGGAGCTCTGGTACCATTCATATTGTTGGCTCAGATTCTTTTTCAAGCTTTTCAAATTGGAAGCAATTATTGGATGGCTTGGGCGACTCCCATCTCAACAGAAGTGGAGCCACCTGTTGGAGGAACGACTCTGATAGTAGTTTATGTTGGTCTGGCTGTTGGAAGTTCTTTCTGCGTCTTTGTCAGAGCAATGCTTCTTGTCATAGCTGGTTACAAGACAGCCACAACACTATTCAATAAAATGCATTTATGCATTTTCCGTGCTCCAATGTCGTTTTTCGATTCCACTCCAAGTGGGCGAGTCCTTAACAGAGCTTCATCTGACCAAAGTGTAGTGGACACAAATATTCCTTATCAAACTGGGTACTTTGCCTTCTCTATGATCCAGCTTCTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTGTCTTTATACCAGTGATAGCAGTTAGCATCTGGTATCAGCAATATTATATACCATCAGCCCGAGAACTATCACGTTTAGTTGGAGTTTGCAAAGCCCCAATCATTCAACACTTTGCTGAAACAATTTCTGGTACTTCAACCATTAGAAGCTTTGATCAGCAATCAAGATTTCAGGAAACAAATATGAAACTGACTGATGGGTATTCTCGGCCACAGTTCAATATTGCTGGTGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCTATCACATTTGTCTTTTCCTTAATATTCTTAATATCTATTCCACCAGGAATCATAGATCCAGGCATTGCTGGTTTAGCTGTTACATATGGACTTAATTTGAACATGGCACAAGCTTACGTGATATGGGATCTCTGCAACTTGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAATATACTAGTATTCCTAGTGAGCCTCCCCTTGTTGTAGAAGAAAATCGGCCAGATCCTTCTTGGCCCTCATATGGCGAGGTTGATATACAAGATTTGCAGGTAGTTCGTTATGCTCCACATCTTCCACTTGTGTTGCGTGGTCTTACATGCAAGTTTCATGGAGGACTAAAAACTGGCATTGTTGGGAGAACAGGAAGTGGAAAATCCACTCTCATTCAAACACTTTTCCGAATTGTTGAGCCTACTTCTGGGCAAGTTATGATTGACAGCATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACAGTGAGAAATAATCTGGACCCCCTGGAAGAATACACTGATGAACAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAACTCGACTCTGCAGTTAGTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTCTGCCTTGGTAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTCCTTGACGAAGCCACTGCATCAGTCGACACAGCTATGGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCTCTGACTCTACAGTCATTACCATTGCGCATCGAATAACTTCGGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGACACCCCAACAACTTTGCTAGAGAATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATGCCATGAGGTCCAACTCCAGTTTTGAGAAATCTGATTGA 4524 0.4202 MLYVFSLLSLMHSATALLLKPIFLHALSGSLHLLLLVAVSLSWLWNKITFTVEPREENSEEKEKPNNITLFKTTVFCSLALSAFSLVLCLFNYFYWYTSGWSEQKLVTLLDLALKTLAWGVVSVSLHKGFSLFFFFTSGEETRFRFSFFFRAWCTFYLIFSCYSFVVDIVVLSEETPIQYLVLVSDVVSTCAGFFFCYVAYFVKNKGHVNGIEEPLLNGEAKEAKGGDTVTPFSHAGVFSILTFSWMGPLVAVGNKKTLDLEDVPQLDTRDSVVSAFPTFRDKLEADCGANAVNTVTTIKLVKNIVMSAWREVLFTAFLVLLKTLASYVGPYLIDAFVQYLDGQRLYENQGYVLVFTFFFAKIVECLSRRHWFFRLQQVGIRIRAVLVTMIYSKALTLSCQSKQGHTSGEMINFMTVDAERVGDFSWYMHDLWMVPLQVALALLILYKNLGLASIAALVATIIVMFANAPLGSLQEKFQSKLMESKDTRMKATSEILRNMRILKLQGWEMKFLSKITELRKTEQGWLKKYVYTNAMTTFVFWGAPTFVSVVTFGTCMLIGIPLESGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRIATFLRLDELRSDVVENVPRGSSDTAIEVIDGNFSWDLSSPNPTLQNINLKVFPGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGKHMDRERYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPASDLILVMKDGRITQRGKYNDLLNSGTDFMELVGAHKKALSTLDSLDGVTTSNEISTLEQDANVSSTHGFKVKEASNDEQNGKINNKSEPKGQLVQEEEREKGQVGFSVYWNYITTAYGGALVPFILLAQILFQAFQIGSNYWMAWATPISTEVEPPVGGTTLIVVYVGLAVGSSFCVFVRAMLLVIAGYKTATTLFNKMHLCIFRAPMSFFDSTPSGRVLNRASSDQSVVDTNIPYQTGYFAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAVSIWYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQETNMKLTDGYSRPQFNIAGAMEWLCFRLDMLSSITFVFSLIFLISIPPGIIDPGIAGLAVTYGLNLNMAQAYVIWDLCNLENKIISVERILQYTSIPSEPPLVVEENRPDPSWPSYGEVDIQDLQVVRYAPHLPLVLRGLTCKFHGGLKTGIVGRTGSGKSTLIQTLFRIVEPTSGQVMIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTAMDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTTLLENKSSSFAQLVAEYAMRSNSSFEKSD 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo139g00002 1507 MobiDBLite consensus disorder prediction 891 913 - -
Pumo139g00002 1507 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524|GO:0016887
Pumo139g00002 1507 CDD ABCC_MRP_domain2 1256 1477 - -
Pumo139g00002 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 314 594 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo139g00002 1507 Gene3D - 609 865 IPR027417 -
Pumo139g00002 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1489 IPR027417 -
Pumo139g00002 1507 Gene3D - 1241 1495 IPR027417 -
Pumo139g00002 1507 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 233 1494 - -
Pumo139g00002 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1260 1493 IPR003439 GO:0005524
Pumo139g00002 1507 FunFam ABC transporter C family member 5 902 1239 - -
Pumo139g00002 1507 CDD ABC_6TM_ABCC_D2 939 1233 IPR044726 GO:0140359
Pumo139g00002 1507 CDD ABC_6TM_ABCC_D1 315 602 IPR044746 GO:0140359
Pumo139g00002 1507 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Pumo139g00002 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 850 IPR027417 -
Pumo139g00002 1507 FunFam ABC transporter C family member 10 297 610 - -
Pumo139g00002 1507 FunFam ABC transporter C family member 5 613 860 - -
Pumo139g00002 1507 SMART AAA_5 655 828 IPR003593 GO:0016887
Pumo139g00002 1507 SMART AAA_5 1285 1478 IPR003593 GO:0016887
Pumo139g00002 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 941 1221 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo139g00002 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 851 IPR003439 GO:0005524
Pumo139g00002 1507 Pfam ABC transporter 1277 1424 IPR003439 GO:0005524
Pumo139g00002 1507 SUPERFAMILY ABC transporter transmembrane region 307 607 IPR036640 GO:0005524|GO:0016020
Pumo139g00002 1507 Gene3D ABC transporter type 1, transmembrane domain 291 608 IPR036640 GO:0005524|GO:0016020
Pumo139g00002 1507 Gene3D ABC transporter type 1, transmembrane domain 901 1239 IPR036640 GO:0005524|GO:0016020
Pumo139g00002 1507 FunFam ABC transporter C family member 3 1241 1494 - -
Pumo139g00002 1507 CDD ABCC_MRP_domain1 628 828 - -
Pumo139g00002 1507 Pfam ABC transporter transmembrane region 314 581 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo139g00002 1507 Pfam ABC transporter transmembrane region 942 1182 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo139g00002 1507 SUPERFAMILY ABC transporter transmembrane region 939 1240 IPR036640 GO:0005524|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo139g00002 628 858 Calmodulin-binding Proteins AT2G36910 29.084 1.74e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo139g00002 - K05666 gmx:100794567 2577.74