Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo136g00004 ATGATGGTTTTTGAGTATGCTCCAAATGGAACGCTATTTGAGCACCTACACATTAGAGAAGCAGAACAACTAGACTGGGGAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGTCTGGAACACTTGCATCAGCTGACACCACCCATTGCCTACAAAAATATACTATCTTCCTCTATATACCTAACTGAAGATTATGCTGCTAAATTATCAGACCTTAGTTTCTGGACTGATATAGTCTCTACGAAGAAGGGTTCTGAAGCCACACAGCTCTTAGAAACAACGTCAGCATATATAAAGGCCAATGTTTACAGCTTTGGAGTACTATTGTTTGAACTGATTACAGGGAAGAATTCCCTTTGCAGTGGAGAATGA 375 0.4027 MMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHLHQLTPPIAYKNILSSSIYLTEDYAAKLSDLSFWTDIVSTKKGSEATQLLETTSAYIKANVYSFGVLLFELITGKNSLCSGE 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo136g00004 124 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Pumo136g00004 124 Pfam Protein tyrosine and serine/threonine kinase 1 118 IPR001245 GO:0004672|GO:0006468
Pumo136g00004 124 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo136g00004 124 SUPERFAMILY Protein kinase-like (PK-like) 1 117 IPR011009 -
Pumo136g00004 124 PANTHER PROTEIN MALE DISCOVERER 2 1 122 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo136g00004 2 117 Receptor kinase-like Gene Family AT1G19390 38.760 1.20e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pumo136g00004 PK_Tyr_Ser-Thr 4.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo136g00004 - - gmx:100814122 230.335