Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo134g00003 ATGTCAGACAATAACGCTCCCCAAATAAGGTATGATGTTTTTGTTAACTTCAGGGGTAAGGACATCCGCAAAGGGTTGCTTAGCCATTTGATTGACACTTTCCGAACAAAGAAAATAAATTACATTGTAGATGATAAACTTGAGAGGGGGCATGAAATATGGGAATCACTTATTGGAGCAATTAAAGGATCATCCATTTTGTTGATCATATTCTCACCAGACTATGCTTCTTCGCATTGGTGTTTAGAAGAACTTGTGACAATACTTGAATGCCAAGAAAAATATAAACAAATTGTAATTCCTGTTTTCTACCAAGTAGAACCCAAAAATGTACGACATCAATTGGGGAGTTACAAAATCGCTTTTGCTAGGCATGGAAGGGAACATAAGACCAAGGTGAAACAATGGAGAGAAGCTTTGAAAAAATCTTCTTATTTATCCGGAATTGAGTCTTCCAAATTTCTGAATGATGCTGAGTTGCTTAAAGAAATTGTCAATCTTGTGTTGAAGATGTTGGCTAAATCTCCTGTTAATTCAAAAAGACTTGTTGGAATTGACAAAAAAATTGCAACCATGGAATCATGGATAAGAGAAGAGCTAAAAGACACCCGTCTTATTGGAATTTGGGGTATGGGCGGTATTGGCAAGACAACCCTTGCAGAAGAAGTATTTAATAAATTACAATCTGAATATGATGCACTTGAACTTTTCAATTTGAATGTCTTTAGCCAAAGTGATCATCAAAGGGAGTACAGTGAGCTATCAAAAATGGTTGTCAATTATGCCCGAGGCATTCCATTAGTTGTTAAAGTTTTGGCTGGTCTTCTTCATGGAAAAAATAAGGAAGACTGGGAAAGTATGCTATACAAGCTTAAAAAAGAGCCTCCTACAAAAGTTGTAATGAAATTGAGTTACGATGATCTAGATCACAAAGGGCAACAAATTTTTCTAGATCTGTCATGTTTCTTTCTTAGAACACATGTACCAGTAAATGTGGGCTATCTAAAATCTTTATTAAAAGATAATGAAAGAGACAATTCAGTGGCTTTTGAGTTAGGAAGGCTGAAAGACAAAGCTCTTATAACTTTGTCTGAGGATAATATTGTATCTATGCATGATAGTTTACAAGAAATGGCTTGGGAGATTGTTCGTCAAGAGTCTATTGAAGACCCTAGAAGTTGCACTCGGTTGTGGGATCCTGATGATATTAATGAAGTATTGAAAAATCACAAGCAAGAGTTAAGCCCTCACATATTTGCTAAGATGAACAGACTAAAATTTCTGGAAATCTCTGGTGATTATTACTGCAAAGAACTTATTCTTGCTGGTGAAAGGTTTCAATTTTTGGCAACTGAACTAAGTTGGGAGAATTATCCTCTAAAATCTTTGCCAGGGAATTCTTCTGCTGAAAAACTTGTAGTACTGAAATTGGGAAACAGTAGATTGGAAAAACTTTGGGATGGAGCGAAGAATCTGGTGAATTTAAAAGAACTTGACCTCTGTAACTCCAGTGAGTTAAAGGAGCTGCCAGATTTATCAAGTGCAACAAATCTTGAAGTGCTGGTTCTCTGGGATTGTTCTAACCTCAGTTATCTCAACCTGTTTGGTTGCTCGAATCTTATGGAATTCTCACTCATATCAGAGAATATGAAAGAACTGGATTTAGGAAGCACGAAGGTCAAAGCACTTCCCCCATCATTTGGACATCAAAGCAAGCTTAAAAAGCTATCTCTATATTCAAGTGCCATTGAGAGGTTACCTTCATCCATCATCAATCTAACGCAACTGCTACATCTTAATGTAAGCCATTGCAGCAATCTTGAAACAATACCAGAGCTTCCCCGGTTCCTTAAAACACTAAATATGGGATATTGCAAATCACTTCAGACTCTACAAAGGCTTCCCCTGTTCCTTGAAACTCTATATGGCGGAGGACGCAAATCATTGAAGACTGTATTGTTCCCTTCAACGGCTGAACAATTAAAGGAAAACAGGACACAAGAAGTTCTGTTATGGGATTGCTTGAACTTGAATGAACAGTCTCTAATGGGTATTGGGCTCAATGCACAAATCAACACGATGAAATATGCAAACAAACACCTTTCTACGACAAACCGCTATCATGTTGAAGGCTTCAAAGGTGATTATTATAATTGTGAGTCTGCTGATCAAGCTGTCTTTGTGTATCCAGGAAGCAGTGTACCAGAGTGGTTGGAGTATAAGACAACAAGCTTTTACAAAATTATTGATCTCTCTTCTGCTTCACCTTCCCCTCGGTTGGCTTCATTTTCTGCTTTGTCCTTGGTGAGTACAAGAATGATAGGTGATGATGAGGAGAAAGGTAAAGAGGACGGTCTCAAAATGTGCTTAAGCTCTACTGGTGGTAACGCAATTAAATCAGATCACGTGTGTGTGATGTACAACCAAAAATGTTCTGACTTCCTAGATAGTCGAGCCAAAAATCAAACAAGGCTCAAAATCGAGGTTAGAATGGAGTCACGTCTCAGCAGTTGGGGATTAGAGAAACCTCTTAATTAG 2538 0.3775 MSDNNAPQIRYDVFVNFRGKDIRKGLLSHLIDTFRTKKINYIVDDKLERGHEIWESLIGAIKGSSILLIIFSPDYASSHWCLEELVTILECQEKYKQIVIPVFYQVEPKNVRHQLGSYKIAFARHGREHKTKVKQWREALKKSSYLSGIESSKFLNDAELLKEIVNLVLKMLAKSPVNSKRLVGIDKKIATMESWIREELKDTRLIGIWGMGGIGKTTLAEEVFNKLQSEYDALELFNLNVFSQSDHQREYSELSKMVVNYARGIPLVVKVLAGLLHGKNKEDWESMLYKLKKEPPTKVVMKLSYDDLDHKGQQIFLDLSCFFLRTHVPVNVGYLKSLLKDNERDNSVAFELGRLKDKALITLSEDNIVSMHDSLQEMAWEIVRQESIEDPRSCTRLWDPDDINEVLKNHKQELSPHIFAKMNRLKFLEISGDYYCKELILAGERFQFLATELSWENYPLKSLPGNSSAEKLVVLKLGNSRLEKLWDGAKNLVNLKELDLCNSSELKELPDLSSATNLEVLVLWDCSNLSYLNLFGCSNLMEFSLISENMKELDLGSTKVKALPPSFGHQSKLKKLSLYSSAIERLPSSIINLTQLLHLNVSHCSNLETIPELPRFLKTLNMGYCKSLQTLQRLPLFLETLYGGGRKSLKTVLFPSTAEQLKENRTQEVLLWDCLNLNEQSLMGIGLNAQINTMKYANKHLSTTNRYHVEGFKGDYYNCESADQAVFVYPGSSVPEWLEYKTTSFYKIIDLSSASPSPRLASFSALSLVSTRMIGDDEEKGKEDGLKMCLSSTGGNAIKSDHVCVMYNQKCSDFLDSRAKNQTRLKIEVRMESRLSSWGLEKPLN 845
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo134g00003 845 Pfam TIR domain 11 178 IPR000157 GO:0007165
Pumo134g00003 845 Gene3D - 228 305 IPR042197 -
Pumo134g00003 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 319 IPR027417 -
Pumo134g00003 845 SUPERFAMILY L domain-like 384 653 - -
Pumo134g00003 845 Gene3D - 5 179 IPR035897 -
Pumo134g00003 845 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 174 - -
Pumo134g00003 845 Gene3D Ribonuclease Inhibitor 528 671 IPR032675 -
Pumo134g00003 845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 232 626 IPR044974 GO:0006952
Pumo134g00003 845 Gene3D Ribonuclease Inhibitor 306 527 IPR032675 -
Pumo134g00003 845 PRINTS Disease resistance protein signature 205 220 - -
Pumo134g00003 845 PRINTS Disease resistance protein signature 490 506 - -
Pumo134g00003 845 ProSiteProfiles TIR domain profile. 9 172 IPR000157 GO:0007165
Pumo134g00003 845 SMART till_3 10 146 IPR000157 GO:0007165
Pumo134g00003 845 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 148 IPR035897 -
Pumo134g00003 845 Pfam NB-ARC domain 201 232 IPR002182 GO:0043531
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo134g00003 251 620 WRKY Transcription Factor Family AT4G12020 31.519 2.47e-41 162
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo134g00003 - - gsj:114404194 729.939