Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo133g00004 ATGGATGGAGCTTCAGAAGAATCTATTGAGACCCTTTTGGTAACTCCACCTCTTAATCTATCTTCCTATCTTCAAGAAGATGTTTACCTTGGTTTCTCTGGCTCAACAAGTAACTACACGGAGCTGAACTGTGTAAGATCATGGGAATTCAGTGGTGTTGATATTGGAGATGGTGATAAAAGCCTCTCGTGGGTTTATATCACTGTTCCAATAGTGGTGATTGTTGTTATTATCATTGTTGGGTTGGTGATCTTTTGGCAAAGGAAACGCCATATGGGGAGGCCAGAAGATGCATGTCCAAGGATAGAGGATCAGATTCAACATTCCTCCATGGCTCCAAAGAAGTTTAAGCTAAGGGAAATAACAAAGGCAACAGGTAGATTCAGCCCTCAAAACAAGCTTGGAGAAGGTGGGTTTGGAACTGTGTATAAAGGGTTATTGGACAACAAGGAGGTAGCTGTGAAGAGAGTCTCCAAGAACTCACGCCAAGGGAAGCAAGAATTTGTGGCAGAAGTGACAACAATTGGAAGCCTTCACCACAGGAATTTGGTGAAACTCACTGGCTGA 567 0.4303 MDGASEESIETLLVTPPLNLSSYLQEDVYLGFSGSTSNYTELNCVRSWEFSGVDIGDGDKSLSWVYITVPIVVIVVIIIVGLVIFWQRKRHMGRPEDACPRIEDQIQHSSMAPKKFKLREITKATGRFSPQNKLGEGGFGTVYKGLLDNKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo133g00004 188 Gene3D - 2 54 - -
Pumo133g00004 188 ProSiteProfiles Protein kinase domain profile. 128 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo133g00004 188 SUPERFAMILY Protein kinase-like (PK-like) 109 188 IPR011009 -
Pumo133g00004 188 Gene3D Phosphorylase Kinase; domain 1 99 188 - -
Pumo133g00004 188 ProSitePatterns Protein kinases ATP-binding region signature. 134 155 IPR017441 GO:0005524
Pumo133g00004 188 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 59 188 - -
Pumo133g00004 188 Pfam Protein kinase domain 131 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo133g00004 188 SUPERFAMILY Concanavalin A-like lectins/glucanases 12 150 IPR013320 -
Pumo133g00004 188 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 101 188 - -
Pumo133g00004 188 Pfam Legume lectin domain 11 53 IPR001220 GO:0030246
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo133g00004 5 188 Receptor kinase-like Gene Family AT5G10530 35.567 1.94e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo133g00004 Pkinase 1.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo133g00004 - - gmx:100790353 302.753